(9 nodes) GID complex network (Chaetomium globosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CHGG_00827	IU_nuc_hydro domain-containing protein. (418 aa)
	CHGG_10925	IU_nuc_hydro domain-containing protein. (364 aa)
	CHGG_10517	Uncharacterized protein. (109 aa)
	CHGG_10379	Uncharacterized protein. (989 aa)
	CHGG_07181	Uncharacterized protein. (718 aa)
	CHGG_04461	Uncharacterized protein. (299 aa)
	FYV10	Protein FYV10; Involved in the proteasome-dependent degradation of fructose- 1,6-bisphosphatase; Belongs to the FYV10 family. (441 aa)
	CHGG_01917	CTLH domain-containing protein. (473 aa)
	CHGG_00984	RED_N domain-containing protein. (726 aa)

Your Current Organism:

Chaetomium globosum

NCBI taxonomy Id: 306901
Other names: C. globosum CBS 148.51, Chaetomium globosum CBS 148.51

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHGG_01917	CHGG_04461	Q2HCY7	Q2H185	CTLH domain-containing protein.	Uncharacterized protein.	0.847
CHGG_01917	CHGG_07181	Q2HCY7	Q2GXX3	CTLH domain-containing protein.	Uncharacterized protein.	0.946
CHGG_01917	FYV10	Q2HCY7	Q2H991	CTLH domain-containing protein.	Protein FYV10; Involved in the proteasome-dependent degradation of fructose- 1,6-bisphosphatase; Belongs to the FYV10 family.	0.480
CHGG_04461	CHGG_01917	Q2H185	Q2HCY7	Uncharacterized protein.	CTLH domain-containing protein.	0.847
CHGG_04461	CHGG_07181	Q2H185	Q2GXX3	Uncharacterized protein.	Uncharacterized protein.	0.767
CHGG_07181	CHGG_01917	Q2GXX3	Q2HCY7	Uncharacterized protein.	CTLH domain-containing protein.	0.946
CHGG_07181	CHGG_04461	Q2GXX3	Q2H185	Uncharacterized protein.	Uncharacterized protein.	0.767
CHGG_07181	FYV10	Q2GXX3	Q2H991	Uncharacterized protein.	Protein FYV10; Involved in the proteasome-dependent degradation of fructose- 1,6-bisphosphatase; Belongs to the FYV10 family.	0.589
FYV10	CHGG_01917	Q2H991	Q2HCY7	Protein FYV10; Involved in the proteasome-dependent degradation of fructose- 1,6-bisphosphatase; Belongs to the FYV10 family.	CTLH domain-containing protein.	0.480
FYV10	CHGG_07181	Q2H991	Q2GXX3	Protein FYV10; Involved in the proteasome-dependent degradation of fructose- 1,6-bisphosphatase; Belongs to the FYV10 family.	Uncharacterized protein.	0.589