STRINGSTRING
CHGG_03554 CHGG_03554 CHGG_06272 CHGG_06272 CHGG_08253 CHGG_08253 CHGG_09809 CHGG_09809 CHGG_07742 CHGG_07742 CHGG_10389 CHGG_10389 CHGG_04829 CHGG_04829 CHGG_06462 CHGG_06462 CHGG_06332 CHGG_06332 CHGG_02751 CHGG_02751 CHGG_02808 CHGG_02808
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CHGG_03554Uncharacterized protein. (199 aa)
CHGG_06272Ribosomal_L14e domain-containing protein. (142 aa)
CHGG_08253KOW domain-containing protein. (138 aa)
CHGG_09809Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (971 aa)
CHGG_077425'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1420 aa)
CHGG_10389Uncharacterized protein. (529 aa)
CHGG_04829Eukaryotic translation initiation factor 5A. (158 aa)
CHGG_0646240S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (262 aa)
CHGG_06332Woronin body major protein. (173 aa)
CHGG_02751Ribosomal_L2_C domain-containing protein. (382 aa)
CHGG_0280860S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (199 aa)
Your Current Organism:
Chaetomium globosum
NCBI taxonomy Id: 306901
Other names: C. globosum CBS 148.51, Chaetomium globosum CBS 148.51
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