15 items (Chaetomium globosum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CHGG_05611	J domain-containing protein. (652 aa)
	CHGG_02854	AMPK1_CBM domain-containing protein. (777 aa)
	CHGG_02826	Uncharacterized protein. (2209 aa)
	CHGG_01538	Uncharacterized protein. (1005 aa)
	CHGG_01481	Arrestin_C domain-containing protein. (836 aa)
	CHGG_00623	Uncharacterized protein. (272 aa)
	CHGG_10367	ANK_REP_REGION domain-containing protein. (1400 aa)
	CHGG_07269	AMPKBI domain-containing protein. (472 aa)
	CHGG_04879	ML domain-containing protein. (157 aa)
	CHGG_04838	FAD-binding FR-type domain-containing protein. (739 aa)
	CHGG_04741	Uncharacterized protein. (2013 aa)
	CHGG_09851	Cytochrome b5 heme-binding domain-containing protein. (558 aa)
	CHGG_08682	AMPK1_CBM domain-containing protein. (732 aa)
	CHGG_10066	Uncharacterized protein. (511 aa)
	CHGG_04159	Uncharacterized protein. (280 aa)

Your Current Organism:

Chaetomium globosum

NCBI taxonomy Id: 306901
Other names: C. globosum CBS 148.51, Chaetomium globosum CBS 148.51

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHGG_00623	CHGG_02826	Q2HGN1	Q2HAC8	Uncharacterized protein.	Uncharacterized protein.	0.890
CHGG_00623	CHGG_04741	Q2HGN1	Q2H0F5	Uncharacterized protein.	Uncharacterized protein.	0.566
CHGG_02826	CHGG_00623	Q2HAC8	Q2HGN1	Uncharacterized protein.	Uncharacterized protein.	0.890
CHGG_02826	CHGG_05611	Q2HAC8	Q2H6V4	Uncharacterized protein.	J domain-containing protein.	0.908
CHGG_04741	CHGG_00623	Q2H0F5	Q2HGN1	Uncharacterized protein.	Uncharacterized protein.	0.566
CHGG_04741	CHGG_05611	Q2H0F5	Q2H6V4	Uncharacterized protein.	J domain-containing protein.	0.430
CHGG_04838	CHGG_09851	Q2H058	Q2GQA3	FAD-binding FR-type domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein.	0.940
CHGG_04838	CHGG_10066	Q2H058	Q2GPN8	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.964
CHGG_05611	CHGG_02826	Q2H6V4	Q2HAC8	J domain-containing protein.	Uncharacterized protein.	0.908
CHGG_05611	CHGG_04741	Q2H6V4	Q2H0F5	J domain-containing protein.	Uncharacterized protein.	0.430
CHGG_09851	CHGG_04838	Q2GQA3	Q2H058	Cytochrome b5 heme-binding domain-containing protein.	FAD-binding FR-type domain-containing protein.	0.940
CHGG_09851	CHGG_10066	Q2GQA3	Q2GPN8	Cytochrome b5 heme-binding domain-containing protein.	Uncharacterized protein.	0.940
CHGG_10066	CHGG_04838	Q2GPN8	Q2H058	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.964
CHGG_10066	CHGG_09851	Q2GPN8	Q2GQA3	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.940