(61 nodes) Mixed, incl. Multivesicular body sorting pathway, and Inflammasomes network (Clavispora lusitaniae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CLUG_00050	Uncharacterized protein. (457 aa)
	CLUG_00246	Uncharacterized protein. (379 aa)
	CLUG_00314	Arrestin_C domain-containing protein. (698 aa)
	CLUG_00444	GLUE N-terminal domain-containing protein. (596 aa)
	CLUG_00660	Nexin_C domain-containing protein. (175 aa)
	CLUG_00661	PX domain-containing protein. (459 aa)
	CLUG_00662	PXA domain-containing protein. (297 aa)
	CLUG_00966	Uncharacterized protein. (943 aa)
	CLUG_01287	Uncharacterized protein. (362 aa)
	CLUG_01301	LDB19 domain-containing protein. (563 aa)
	CLUG_01318	DUF3533 domain-containing protein. (518 aa)
	CLUG_01327	RBR-type E3 ubiquitin transferase. (480 aa)
	CLUG_01555	Uncharacterized protein. (199 aa)
	CLUG_01727	BRO1 domain-containing protein. (756 aa)
	CLUG_01736	Uncharacterized protein. (588 aa)
	CLUG_01886	Uncharacterized protein. (212 aa)
	CLUG_01906	Uncharacterized protein. (187 aa)
	CLUG_02003	BRO1 domain-containing protein. (160 aa)
	CLUG_02004	BRO1 domain-containing protein. (618 aa)
	CLUG_02011	Uncharacterized protein. (445 aa)
	CLUG_02022	Uncharacterized protein. (443 aa)
	CLUG_02939	Uncharacterized protein. (254 aa)
	CLUG_02981	DUF3533 domain-containing protein. (567 aa)
	CLUG_02982	DUF3533 domain-containing protein. (541 aa)
	CLUG_03011	Uncharacterized protein. (285 aa)
	CLUG_03033	Uncharacterized protein. (1331 aa)
	CLUG_02314	Uncharacterized protein. (168 aa)
	CLUG_02375	Uncharacterized protein. (496 aa)
	CLUG_02418	E3 ubiquitin-protein ligase. (766 aa)
	CLUG_02456	RING-type domain-containing protein. (576 aa)
	CLUG_02514	AAA domain-containing protein. (760 aa)
	CLUG_02623	SMP-LTD domain-containing protein. (769 aa)
	CLUG_02640	Uncharacterized protein. (291 aa)
	CLUG_03445	Arrestin_C domain-containing protein. (700 aa)
	CLUG_03574	PXA domain-containing protein. (539 aa)
	CLUG_03644	Arrestin_N domain-containing protein. (623 aa)
	CLUG_03835	Uncharacterized protein. (473 aa)
	CLUG_03852	Arrestin_C domain-containing protein. (1027 aa)
	CLUG_03948	Uncharacterized protein. (869 aa)
	CLUG_04035	Arrestin_C domain-containing protein. (609 aa)
	CLUG_04169	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (268 aa)
	CLUG_04240	Uncharacterized protein. (198 aa)
	CLUG_04261	Uncharacterized protein. (237 aa)
	CLUG_04274	Uncharacterized protein. (142 aa)
	CLUG_04378	Uncharacterized protein. (203 aa)
	CLUG_04470	Uncharacterized protein. (222 aa)
	CLUG_04554	Uncharacterized protein. (477 aa)
	CLUG_04653	Uncharacterized protein. (314 aa)
	CLUG_04694	TEA domain-containing protein. (577 aa)
	CLUG_04803	Uncharacterized protein. (80 aa)
	CLUG_05169	Uncharacterized protein; Belongs to the AAA ATPase family. (431 aa)
	CLUG_05056	UEV domain-containing protein. (518 aa)
	CLUG_05226	Uncharacterized protein. (226 aa)
	CLUG_05301	Uncharacterized protein. (134 aa)
	CLUG_05415	Uncharacterized protein. (475 aa)
	CLUG_05454	Uncharacterized protein. (326 aa)
	CLUG_05313	Arrestin_C domain-containing protein. (983 aa)
	CLUG_05378	Uncharacterized protein. (568 aa)
	CLUG_05481	Uncharacterized protein. (214 aa)
	CLUG_05670	Ubiquitin carboxyl-terminal hydrolase. (831 aa)
	CLUG_05754	RING-type domain-containing protein. (570 aa)

Your Current Organism:

Clavispora lusitaniae

NCBI taxonomy Id: 306902
Other names: C. lusitaniae ATCC 42720, Candida lusitaniae ATCC 42720, Clavispora lusitaniae ATCC 42720

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLUG_00050	CLUG_00444	C4XVN1	C4XWX1	Uncharacterized protein.	GLUE N-terminal domain-containing protein.	0.715
CLUG_00050	CLUG_01287	C4XVN1	C4XZA5	Uncharacterized protein.	Uncharacterized protein.	0.756
CLUG_00050	CLUG_01555	C4XVN1	C4Y023	Uncharacterized protein.	Uncharacterized protein.	0.642
CLUG_00050	CLUG_01886	C4XVN1	C4Y104	Uncharacterized protein.	Uncharacterized protein.	0.985
CLUG_00050	CLUG_01906	C4XVN1	C4Y124	Uncharacterized protein.	Uncharacterized protein.	0.830
CLUG_00050	CLUG_02514	C4XVN1	C4Y4E2	Uncharacterized protein.	AAA domain-containing protein.	0.766
CLUG_00050	CLUG_02939	C4XVN1	C4Y326	Uncharacterized protein.	Uncharacterized protein.	0.861
CLUG_00050	CLUG_04169	C4XVN1	C4Y7J1	Uncharacterized protein.	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.773
CLUG_00050	CLUG_04261	C4XVN1	C4Y7T3	Uncharacterized protein.	Uncharacterized protein.	0.633
CLUG_00050	CLUG_04378	C4XVN1	C4Y850	Uncharacterized protein.	Uncharacterized protein.	0.987
CLUG_00050	CLUG_04470	C4XVN1	C4Y8E2	Uncharacterized protein.	Uncharacterized protein.	0.988
CLUG_00050	CLUG_05056	C4XVN1	C4YAB8	Uncharacterized protein.	UEV domain-containing protein.	0.733
CLUG_00050	CLUG_05169	C4XVN1	C4Y9U8	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.775
CLUG_00050	CLUG_05226	C4XVN1	C4YAJ8	Uncharacterized protein.	Uncharacterized protein.	0.869
CLUG_00050	CLUG_05481	C4XVN1	C4YBA3	Uncharacterized protein.	Uncharacterized protein.	0.775
CLUG_00246	CLUG_02418	C4XWC3	C4Y446	Uncharacterized protein.	E3 ubiquitin-protein ligase.	0.710
CLUG_00246	CLUG_03033	C4XWC3	C4Y3C0	Uncharacterized protein.	Uncharacterized protein.	0.619
CLUG_00246	CLUG_03948	C4XWC3	C4Y714	Uncharacterized protein.	Uncharacterized protein.	0.619
CLUG_00314	CLUG_02418	C4XWJ1	C4Y446	Arrestin_C domain-containing protein.	E3 ubiquitin-protein ligase.	0.617
CLUG_00314	CLUG_03948	C4XWJ1	C4Y714	Arrestin_C domain-containing protein.	Uncharacterized protein.	0.453