(21 nodes) AH/BAR domain superfamily network (Clavispora lusitaniae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CLUG_01535	Uncharacterized protein. (937 aa)
	CLUG_01553	Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family. (523 aa)
	CLUG_01153	Uncharacterized protein. (468 aa)
	CLUG_01616	Uncharacterized protein. (309 aa)
	CLUG_02236	Uncharacterized protein. (1185 aa)
	CLUG_02798	Uncharacterized protein. (596 aa)
	CLUG_02889	PX domain-containing protein. (596 aa)
	CLUG_01359	Uncharacterized protein. (699 aa)
	CLUG_04811	Uncharacterized protein. (925 aa)
	CLUG_05073	BAR domain-containing protein. (248 aa)
	CLUG_03334	SH3 domain-containing protein. (626 aa)
	CLUG_04494	Uncharacterized protein. (325 aa)
	CLUG_04697	Uncharacterized protein. (265 aa)
	CLUG_00440	Uncharacterized protein. (304 aa)
	CLUG_03361	Uncharacterized protein. (328 aa)
	CLUG_03735	F-BAR domain-containing protein. (256 aa)
	CLUG_01016	Uncharacterized protein. (892 aa)
	CLUG_03745	PX domain-containing protein. (660 aa)
	CLUG_03843	Uncharacterized protein. (342 aa)
	CLUG_03860	PX domain-containing protein. (652 aa)
	CLUG_02310	MHD domain-containing protein. (828 aa)

Your Current Organism:

Clavispora lusitaniae

NCBI taxonomy Id: 306902
Other names: C. lusitaniae ATCC 42720, Candida lusitaniae ATCC 42720, Clavispora lusitaniae ATCC 42720

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLUG_00440	CLUG_01153	C4XWW7	C4XYY0	Uncharacterized protein.	Uncharacterized protein.	0.685
CLUG_00440	CLUG_01616	C4XWW7	C4Y084	Uncharacterized protein.	Uncharacterized protein.	0.417
CLUG_01016	CLUG_03735	C4XYJ3	C4Y6F2	Uncharacterized protein.	F-BAR domain-containing protein.	0.462
CLUG_01153	CLUG_00440	C4XYY0	C4XWW7	Uncharacterized protein.	Uncharacterized protein.	0.685
CLUG_01153	CLUG_01359	C4XYY0	C4XZH7	Uncharacterized protein.	Uncharacterized protein.	0.533
CLUG_01153	CLUG_02798	C4XYY0	C4Y2N5	Uncharacterized protein.	Uncharacterized protein.	0.595
CLUG_01153	CLUG_04697	C4XYY0	C4Y920	Uncharacterized protein.	Uncharacterized protein.	0.839
CLUG_01153	CLUG_05073	C4XYY0	C4YAD5	Uncharacterized protein.	BAR domain-containing protein.	0.975
CLUG_01359	CLUG_01153	C4XZH7	C4XYY0	Uncharacterized protein.	Uncharacterized protein.	0.533
CLUG_01359	CLUG_02798	C4XZH7	C4Y2N5	Uncharacterized protein.	Uncharacterized protein.	0.806
CLUG_01359	CLUG_03334	C4XZH7	C4Y5A0	Uncharacterized protein.	SH3 domain-containing protein.	0.482
CLUG_01359	CLUG_03735	C4XZH7	C4Y6F2	Uncharacterized protein.	F-BAR domain-containing protein.	0.683
CLUG_01359	CLUG_04697	C4XZH7	C4Y920	Uncharacterized protein.	Uncharacterized protein.	0.504
CLUG_01359	CLUG_05073	C4XZH7	C4YAD5	Uncharacterized protein.	BAR domain-containing protein.	0.504
CLUG_01553	CLUG_02889	C4Y021	C4Y2X6	Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family.	PX domain-containing protein.	0.552
CLUG_01553	CLUG_03745	C4Y021	C4Y6G2	Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family.	PX domain-containing protein.	0.906
CLUG_01616	CLUG_00440	C4Y084	C4XWW7	Uncharacterized protein.	Uncharacterized protein.	0.417
CLUG_02798	CLUG_01153	C4Y2N5	C4XYY0	Uncharacterized protein.	Uncharacterized protein.	0.595
CLUG_02798	CLUG_01359	C4Y2N5	C4XZH7	Uncharacterized protein.	Uncharacterized protein.	0.806
CLUG_02798	CLUG_05073	C4Y2N5	C4YAD5	Uncharacterized protein.	BAR domain-containing protein.	0.472