30 items (Clavispora lusitaniae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CLUG_01607	Uncharacterized protein. (1014 aa)
	CLUG_05815	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (112 aa)
	CLUG_05531	GATA-type domain-containing protein. (603 aa)
	CLUG_05066	TATA-box binding protein. (237 aa)
	CLUG_05012	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (553 aa)
	CLUG_04972	Uncharacterized protein. (260 aa)
	CLUG_05175	Uncharacterized protein. (156 aa)
	CLUG_04754	Uncharacterized protein. (73 aa)
	CLUG_04706	DNA-directed RNA polymerases II 24 kDa polypeptide. (287 aa)
	CLUG_03630	Uncharacterized protein. (369 aa)
	CLUG_03629	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (858 aa)
	CLUG_03627	S1 motif domain-containing protein. (141 aa)
	CLUG_03468	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1402 aa)
	CLUG_02606	RPOL4c domain-containing protein. (191 aa)
	CLUG_02493	Histone H2B; Belongs to the histone H2B family. (130 aa)
	CLUG_02483	CYCLIN domain-containing protein; Belongs to the cyclin family. (400 aa)
	CLUG_02479	Histone acetyltransferase GCN5. (497 aa)
	CLUG_02347	CYCLIN domain-containing protein; Belongs to the cyclin family. (355 aa)
	CLUG_03164	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (148 aa)
	CLUG_03084	Uncharacterized protein. (392 aa)
	CLUG_02949	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (495 aa)
	CLUG_02781	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (437 aa)
	CLUG_02232	Uncharacterized protein; Belongs to the DEAD box helicase family. (419 aa)
	CLUG_02119	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (121 aa)
	CLUG_01858	GATA-type domain-containing protein. (563 aa)
	CLUG_01333	Uncharacterized protein. (666 aa)
	CLUG_00875	RPOLD domain-containing protein. (307 aa)
	CLUG_00424	GATA-type domain-containing protein. (527 aa)
	CLUG_00244	Fork-head domain-containing protein. (489 aa)
	CLUG_00020	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (337 aa)

Your Current Organism:

Clavispora lusitaniae

NCBI taxonomy Id: 306902
Other names: C. lusitaniae ATCC 42720, Candida lusitaniae ATCC 42720, Clavispora lusitaniae ATCC 42720

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLUG_00020	CLUG_01858	C4XVU1	C4Y0X6	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	GATA-type domain-containing protein.	0.482
CLUG_00020	CLUG_02232	C4XVU1	C4Y200	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.767
CLUG_00020	CLUG_02479	C4XVU1	C4Y4A7	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Histone acetyltransferase GCN5.	0.681
CLUG_00020	CLUG_02493	C4XVU1	C4Y4C1	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Histone H2B; Belongs to the histone H2B family.	0.479
CLUG_00020	CLUG_02949	C4XVU1	C4Y336	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.518
CLUG_00020	CLUG_05066	C4XVU1	C4YAC8	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	TATA-box binding protein.	0.646
CLUG_00020	CLUG_05531	C4XVU1	C4YBF3	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	GATA-type domain-containing protein.	0.482
CLUG_00244	CLUG_00424	C4XWC1	C4XWV1	Fork-head domain-containing protein.	GATA-type domain-containing protein.	0.525
CLUG_00244	CLUG_01333	C4XWC1	C4XZF1	Fork-head domain-containing protein.	Uncharacterized protein.	0.566
CLUG_00244	CLUG_01607	C4XWC1	C4Y075	Fork-head domain-containing protein.	Uncharacterized protein.	0.488
CLUG_00424	CLUG_00244	C4XWV1	C4XWC1	GATA-type domain-containing protein.	Fork-head domain-containing protein.	0.525
CLUG_00424	CLUG_01333	C4XWV1	C4XZF1	GATA-type domain-containing protein.	Uncharacterized protein.	0.408
CLUG_00424	CLUG_02479	C4XWV1	C4Y4A7	GATA-type domain-containing protein.	Histone acetyltransferase GCN5.	0.423
CLUG_00875	CLUG_02119	C4XY52	C4Y1N7	RPOLD domain-containing protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.935
CLUG_00875	CLUG_02347	C4XY52	C4Y3X5	RPOLD domain-containing protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.718
CLUG_00875	CLUG_02479	C4XY52	C4Y4A7	RPOLD domain-containing protein.	Histone acetyltransferase GCN5.	0.477
CLUG_00875	CLUG_02483	C4XY52	C4Y4B1	RPOLD domain-containing protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.631
CLUG_00875	CLUG_02493	C4XY52	C4Y4C1	RPOLD domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.888
CLUG_00875	CLUG_02606	C4XY52	C4Y4N4	RPOLD domain-containing protein.	RPOL4c domain-containing protein.	0.999
CLUG_00875	CLUG_02781	C4XY52	C4Y2L8	RPOLD domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.693