STRINGSTRING
got1 got1 nit2 nit2 LOC112153948 LOC112153948 fh fh GOT1 GOT1 mdh1 mdh1 LOC112161617 LOC112161617 got2 got2 ENSOMEP00000031390 ENSOMEP00000031390 ENSOMEP00000034591 ENSOMEP00000034591 ddo ddo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
got1Aspartate aminotransferase. (441 aa)
nit2Nitrilase family, member 2. (286 aa)
LOC112153948ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family. (1124 aa)
fhFumarate hydratase. (499 aa)
GOT1Aspartate aminotransferase. (410 aa)
mdh1Malate dehydrogenase. (350 aa)
LOC112161617Malate dehydrogenase. (333 aa)
got2Aspartate aminotransferase. (428 aa)
ENSOMEP00000031390Malate dehydrogenase. (209 aa)
ENSOMEP00000034591Citrate synthase; Belongs to the citrate synthase family. (471 aa)
ddoZgc:172341. (337 aa)
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.