(26 nodes) acyl-CoA hydrolase activity, and Acylphosphatase network (Oryzias melastigma)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	acot8	Acyl-CoA thioesterase 8. (337 aa)
	acot7	Acyl-CoA thioesterase 7. (348 aa)
	lingo3	Leucine rich repeat and Ig domain containing 3a. (608 aa)
	acot11	Acyl-CoA thioesterase 11b. (584 aa)
	LOC112143157	Thioesterase superfamily member 4. (248 aa)
	LOC112150829	Abhydrolase domain containing 17A. (319 aa)
	ENSOMEP00000005445	C19h1orf109 homolog (H. sapiens). (157 aa)
	ENSOMEP00000005970	Rubicon like autophagy enhancer. (383 aa)
	ENSOMEP00000006496	BAAT_C domain-containing protein. (204 aa)
	LOC112147450	Peptidase_S9 domain-containing protein. (351 aa)
	znf277	Zinc finger protein 277. (438 aa)
	ACYP1	Acylphosphatase. (129 aa)
	LOC112141562	Calcium homeostasis modulator family member 6. (320 aa)
	fbxo47	F-box domain-containing protein. (438 aa)
	LOC112158782	Acyl-CoA thioesterase 16. (427 aa)
	LOC112162957	Uncharacterized protein. (423 aa)
	ENSOMEP00000021624	BAAT_C domain-containing protein. (250 aa)
	ENSOMEP00000021899	Acylphosphatase 2, muscle type; Belongs to the acylphosphatase family. (96 aa)
	cunh5orf22	Zgc:56556. (545 aa)
	LOC112144281	Uncharacterized protein. (634 aa)
	LOC112138814	Uncharacterized protein. (424 aa)
	ENSOMEP00000032900	Uncharacterized protein. (509 aa)
	LOC112145720	Uncharacterized protein. (466 aa)
	ENSOMEP00000034526	Calcium homeostasis modulator family member 5, tandem duplicate 2. (239 aa)
	ENSOMEP00000035958	Bile_Hydr_Trans domain-containing protein. (269 aa)
	ENSOMEP00000036321	Uncharacterized protein. (415 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACYP1	ENSOMEP00000021899	ENSOMEP00000019273	ENSOMEP00000021899	Acylphosphatase.	Acylphosphatase 2, muscle type; Belongs to the acylphosphatase family.	0.890
ACYP1	LOC112144281	ENSOMEP00000019273	ENSOMEP00000023248	Acylphosphatase.	Uncharacterized protein.	0.672
ACYP1	acot11	ENSOMEP00000019273	ENSOMEP00000004449	Acylphosphatase.	Acyl-CoA thioesterase 11b.	0.672
ACYP1	acot7	ENSOMEP00000019273	ENSOMEP00000003760	Acylphosphatase.	Acyl-CoA thioesterase 7.	0.601
ENSOMEP00000005445	ENSOMEP00000005970	ENSOMEP00000005445	ENSOMEP00000005970	C19h1orf109 homolog (H. sapiens).	Rubicon like autophagy enhancer.	0.856
ENSOMEP00000005445	ENSOMEP00000034526	ENSOMEP00000005445	ENSOMEP00000034526	C19h1orf109 homolog (H. sapiens).	Calcium homeostasis modulator family member 5, tandem duplicate 2.	0.786
ENSOMEP00000005445	LOC112141562	ENSOMEP00000005445	ENSOMEP00000019700	C19h1orf109 homolog (H. sapiens).	Calcium homeostasis modulator family member 6.	0.786
ENSOMEP00000005445	LOC112144281	ENSOMEP00000005445	ENSOMEP00000023248	C19h1orf109 homolog (H. sapiens).	Uncharacterized protein.	0.796
ENSOMEP00000005445	acot11	ENSOMEP00000005445	ENSOMEP00000004449	C19h1orf109 homolog (H. sapiens).	Acyl-CoA thioesterase 11b.	0.796
ENSOMEP00000005445	cunh5orf22	ENSOMEP00000005445	ENSOMEP00000023153	C19h1orf109 homolog (H. sapiens).	Zgc:56556.	0.688
ENSOMEP00000005445	fbxo47	ENSOMEP00000005445	ENSOMEP00000021274	C19h1orf109 homolog (H. sapiens).	F-box domain-containing protein.	0.780
ENSOMEP00000005445	lingo3	ENSOMEP00000005445	ENSOMEP00000003765	C19h1orf109 homolog (H. sapiens).	Leucine rich repeat and Ig domain containing 3a.	0.697
ENSOMEP00000005970	ENSOMEP00000005445	ENSOMEP00000005970	ENSOMEP00000005445	Rubicon like autophagy enhancer.	C19h1orf109 homolog (H. sapiens).	0.856
ENSOMEP00000005970	ENSOMEP00000034526	ENSOMEP00000005970	ENSOMEP00000034526	Rubicon like autophagy enhancer.	Calcium homeostasis modulator family member 5, tandem duplicate 2.	0.750
ENSOMEP00000005970	LOC112141562	ENSOMEP00000005970	ENSOMEP00000019700	Rubicon like autophagy enhancer.	Calcium homeostasis modulator family member 6.	0.750
ENSOMEP00000005970	LOC112144281	ENSOMEP00000005970	ENSOMEP00000023248	Rubicon like autophagy enhancer.	Uncharacterized protein.	0.796
ENSOMEP00000005970	acot11	ENSOMEP00000005970	ENSOMEP00000004449	Rubicon like autophagy enhancer.	Acyl-CoA thioesterase 11b.	0.796
ENSOMEP00000005970	cunh5orf22	ENSOMEP00000005970	ENSOMEP00000023153	Rubicon like autophagy enhancer.	Zgc:56556.	0.654
ENSOMEP00000005970	fbxo47	ENSOMEP00000005970	ENSOMEP00000021274	Rubicon like autophagy enhancer.	F-box domain-containing protein.	0.491
ENSOMEP00000006496	ENSOMEP00000032900	ENSOMEP00000006496	ENSOMEP00000032900	BAAT_C domain-containing protein.	Uncharacterized protein.	0.672