51 items (Oryzias melastigma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC112154136	Si:ch1073-416j23.1. (641 aa)
	LOC112157938	Guanine nucleotide binding protein (G protein), alpha 13b. (378 aa)
	CDC42	Cell division cycle 42. (191 aa)
	LOC112142439	Rho GTPase activating protein 35b. (1529 aa)
	ENSOMEP00000004313	Uncharacterized protein. (275 aa)
	cdc42ep4	CDC42 effector protein (Rho GTPase binding) 4b. (329 aa)
	LOC112154003	Uncharacterized protein. (377 aa)
	LOC112157050	Uncharacterized protein. (203 aa)
	LOC112146066	CDC42 effector protein (Rho GTPase binding) 4a. (345 aa)
	ENSOMEP00000006887	Ras homolog gene family, member Gd. (125 aa)
	ENSOMEP00000007226	CDC42 effector protein (Rho GTPase binding) 1a. (349 aa)
	rock1	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1380 aa)
	tax1bp3	Tax1 (human T-cell leukemia virus type I) binding protein 3. (125 aa)
	ENSOMEP00000009022	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1383 aa)
	phactr4	Phosphatase and actin regulator. (918 aa)
	ENSOMEP00000009451	CDC42 effector protein (Rho GTPase binding) 5. (219 aa)
	ENSOMEP00000009837	Pleckstrin homology domain containing, family G (with RhoGef domain) member 7. (533 aa)
	LOC112143725	Uncharacterized protein. (191 aa)
	ENSOMEP00000013085	PTB domain-containing protein. (92 aa)
	ctnnal1	Catenin (cadherin-associated protein), alpha-like 1. (757 aa)
	LOC112154057	Eps8 like 1b. (665 aa)
	LOC112145706	Uncharacterized protein. (635 aa)
	LOC112137131	Uncharacterized protein. (191 aa)
	LOC112138676	Ras homolog family member Gb. (191 aa)
	EPS8L2	EPS8 like 2. (697 aa)
	LOC112146024	Rho GDP dissociation inhibitor (GDI) alpha. (205 aa)
	ENSOMEP00000018652	Nerve growth factor receptor a (TNFR superfamily, member 16). (406 aa)
	ENSOMEP00000019434	Rac GTPase activating protein 1. (641 aa)
	LOC112146891	Rho GDP dissociation inhibitor (GDI) gamma. (222 aa)
	eps8	Epidermal growth factor receptor pathway substrate 8a. (825 aa)
	gna12	G protein subunit alpha 12. (385 aa)
	LOC112154655	Nerve growth factor receptor b. (436 aa)
	ENSOMEP00000021276	Zgc:154093. (263 aa)
	LOC112144774	Cell division cycle 42. (191 aa)
	shtn1	Shootin 1. (523 aa)
	LOC112158426	Ras homolog family member V. (286 aa)
	ENSOMEP00000024026	Uncharacterized protein. (123 aa)
	LOC112147366	Phosphatase and actin regulator. (585 aa)
	agtr1	Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family. (363 aa)
	arhgap5	Rho GTPase activating protein 5. (1504 aa)
	itga3	Integrin, alpha 3b; Belongs to the integrin alpha chain family. (1054 aa)
	LOC112145891	CDC42 effector protein (Rho GTPase binding) 1b. (344 aa)
	cnksr1	Connector enhancer of kinase suppressor of Ras 1. (833 aa)
	LOC112148709	CDC42 effector protein (Rho GTPase binding) 3. (342 aa)
	LOC112149825	Ras homolog family member Ub. (243 aa)
	arhgap35	Rho GTPase activating protein 35a. (1562 aa)
	LOC112150811	Phosphatase and actin regulator. (593 aa)
	LOC112145871	Eps8 like 1a. (494 aa)
	LOC112160746	Phosphatase and actin regulator 4a. (1168 aa)
	LOC112159475	EPS8-like 3b. (677 aa)
	LOC112139281	Uncharacterized protein. (176 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	ENSOMEP00000004313	ENSOMEP00000003168	ENSOMEP00000004313	Cell division cycle 42.	Uncharacterized protein.	0.593
CDC42	ENSOMEP00000006887	ENSOMEP00000003168	ENSOMEP00000006887	Cell division cycle 42.	Ras homolog gene family, member Gd.	0.642
CDC42	ENSOMEP00000007226	ENSOMEP00000003168	ENSOMEP00000007226	Cell division cycle 42.	CDC42 effector protein (Rho GTPase binding) 1a.	0.795
CDC42	ENSOMEP00000009022	ENSOMEP00000003168	ENSOMEP00000009022	Cell division cycle 42.	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.	0.647
CDC42	ENSOMEP00000009451	ENSOMEP00000003168	ENSOMEP00000009451	Cell division cycle 42.	CDC42 effector protein (Rho GTPase binding) 5.	0.774
CDC42	ENSOMEP00000009837	ENSOMEP00000003168	ENSOMEP00000009837	Cell division cycle 42.	Pleckstrin homology domain containing, family G (with RhoGef domain) member 7.	0.425
CDC42	ENSOMEP00000018652	ENSOMEP00000003168	ENSOMEP00000018652	Cell division cycle 42.	Nerve growth factor receptor a (TNFR superfamily, member 16).	0.758
CDC42	ENSOMEP00000019434	ENSOMEP00000003168	ENSOMEP00000019434	Cell division cycle 42.	Rac GTPase activating protein 1.	0.849
CDC42	LOC112137131	ENSOMEP00000003168	ENSOMEP00000014906	Cell division cycle 42.	Uncharacterized protein.	0.628
CDC42	LOC112138676	ENSOMEP00000003168	ENSOMEP00000015972	Cell division cycle 42.	Ras homolog family member Gb.	0.641
CDC42	LOC112139281	ENSOMEP00000003168	ENSOMEP00000036040	Cell division cycle 42.	Uncharacterized protein.	0.628
CDC42	LOC112142439	ENSOMEP00000003168	ENSOMEP00000003259	Cell division cycle 42.	Rho GTPase activating protein 35b.	0.637
CDC42	LOC112143725	ENSOMEP00000003168	ENSOMEP00000012109	Cell division cycle 42.	Uncharacterized protein.	0.860
CDC42	LOC112145706	ENSOMEP00000003168	ENSOMEP00000014864	Cell division cycle 42.	Uncharacterized protein.	0.849
CDC42	LOC112145891	ENSOMEP00000003168	ENSOMEP00000025119	Cell division cycle 42.	CDC42 effector protein (Rho GTPase binding) 1b.	0.522
CDC42	LOC112146024	ENSOMEP00000003168	ENSOMEP00000017436	Cell division cycle 42.	Rho GDP dissociation inhibitor (GDI) alpha.	0.895
CDC42	LOC112146066	ENSOMEP00000003168	ENSOMEP00000006330	Cell division cycle 42.	CDC42 effector protein (Rho GTPase binding) 4a.	0.593
CDC42	LOC112146891	ENSOMEP00000003168	ENSOMEP00000019575	Cell division cycle 42.	Rho GDP dissociation inhibitor (GDI) gamma.	0.895
CDC42	LOC112148709	ENSOMEP00000003168	ENSOMEP00000029158	Cell division cycle 42.	CDC42 effector protein (Rho GTPase binding) 3.	0.513
CDC42	LOC112149825	ENSOMEP00000003168	ENSOMEP00000029906	Cell division cycle 42.	Ras homolog family member Ub.	0.593