STRINGSTRING
LOC112149564 LOC112149564 LOC112146043 LOC112146043 LOC112163232 LOC112163232 LOC112153984 LOC112153984 kat2a kat2a mcm3ap mcm3ap
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC112149564BRCA2 DNA repair associated. (2893 aa)
LOC112146043E1A binding protein p300 b. (2771 aa)
LOC112163232Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (794 aa)
LOC112153984E1A binding protein p300 a. (2690 aa)
kat2aHistone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (810 aa)
mcm3apMinichromosome maintenance complex component 3 associated protein. (2038 aa)
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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