STRINGSTRING
nexmif nexmif LOC112159975 LOC112159975 rasa1 rasa1 ARHGAP6-2 ARHGAP6-2 ENSOMEP00000006103 ENSOMEP00000006103 LOC112151546 LOC112151546 ENSOMEP00000036011 ENSOMEP00000036011 ajap1 ajap1 LOC112147854 LOC112147854 acer2 acer2 ENSOMEP00000024914 ENSOMEP00000024914 fzd4 fzd4 LOC112161494 LOC112161494 LOC112151025 LOC112151025 ENSOMEP00000021669 ENSOMEP00000021669 ap1ar ap1ar LOC112138975 LOC112138975 MYOC MYOC CASK CASK itgb1bp1 itgb1bp1 ENSOMEP00000002155 ENSOMEP00000002155 ENSOMEP00000004377 ENSOMEP00000004377
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nexmifNeurite extension and migration factor b. (1422 aa)
LOC112159975Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family. (983 aa)
rasa1RAS p21 protein activator (GTPase activating protein) 1a. (1053 aa)
ARHGAP6-2Rho GTPase activating protein 6. (735 aa)
ENSOMEP00000006103Tubulin folding cofactor D. (1084 aa)
LOC112151546Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family. (199 aa)
ENSOMEP00000036011BCAS3 microtubule associated cell migration factor. (498 aa)
ajap1Adherens junctions associated protein 1. (386 aa)
LOC112147854Apolipoprotein Da, duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (204 aa)
acer2Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (277 aa)
ENSOMEP00000024914C2H2-type domain-containing protein. (513 aa)
fzd4Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family. (525 aa)
LOC112161494Epithelial cell adhesion molecule. (391 aa)
LOC112151025Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family. (181 aa)
ENSOMEP00000021669Uncharacterized protein. (57 aa)
ap1arAdaptor related protein complex 1 associated regulatory protein. (299 aa)
LOC112138975Myocilin. (463 aa)
MYOCMyocilin. (458 aa)
CASKCalcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. (957 aa)
itgb1bp1Integrin beta 1 binding protein 1. (198 aa)
ENSOMEP00000002155Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family. (394 aa)
ENSOMEP00000004377Sprouty homolog 4 (Drosophila). (297 aa)
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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