(4 nodes) Long-chain fatty acid import into peroxisome network (Oryzias melastigma)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	abcd3	ATP-binding cassette, sub-family D (ALD), member 3a. (711 aa)
	LOC112158905	ATP-binding cassette, sub-family D (ALD), member 1. (749 aa)
	abcd4	ATP-binding cassette, sub-family D (ALD), member 4. (616 aa)
	abcd2	ATP-binding cassette, sub-family D (ALD), member 2. (734 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC112158905	abcd2	ENSOMEP00000010057	ENSOMEP00000031166	ATP-binding cassette, sub-family D (ALD), member 1.	ATP-binding cassette, sub-family D (ALD), member 2.	0.870
LOC112158905	abcd3	ENSOMEP00000010057	ENSOMEP00000021945	ATP-binding cassette, sub-family D (ALD), member 1.	ATP-binding cassette, sub-family D (ALD), member 3a.	0.884
LOC112158905	abcd4	ENSOMEP00000010057	ENSOMEP00000034730	ATP-binding cassette, sub-family D (ALD), member 1.	ATP-binding cassette, sub-family D (ALD), member 4.	0.925
abcd2	LOC112158905	ENSOMEP00000031166	ENSOMEP00000010057	ATP-binding cassette, sub-family D (ALD), member 2.	ATP-binding cassette, sub-family D (ALD), member 1.	0.870
abcd2	abcd3	ENSOMEP00000031166	ENSOMEP00000021945	ATP-binding cassette, sub-family D (ALD), member 2.	ATP-binding cassette, sub-family D (ALD), member 3a.	0.945
abcd2	abcd4	ENSOMEP00000031166	ENSOMEP00000034730	ATP-binding cassette, sub-family D (ALD), member 2.	ATP-binding cassette, sub-family D (ALD), member 4.	0.937
abcd3	LOC112158905	ENSOMEP00000021945	ENSOMEP00000010057	ATP-binding cassette, sub-family D (ALD), member 3a.	ATP-binding cassette, sub-family D (ALD), member 1.	0.884
abcd3	abcd2	ENSOMEP00000021945	ENSOMEP00000031166	ATP-binding cassette, sub-family D (ALD), member 3a.	ATP-binding cassette, sub-family D (ALD), member 2.	0.945
abcd3	abcd4	ENSOMEP00000021945	ENSOMEP00000034730	ATP-binding cassette, sub-family D (ALD), member 3a.	ATP-binding cassette, sub-family D (ALD), member 4.	0.892
abcd4	LOC112158905	ENSOMEP00000034730	ENSOMEP00000010057	ATP-binding cassette, sub-family D (ALD), member 4.	ATP-binding cassette, sub-family D (ALD), member 1.	0.925
abcd4	abcd2	ENSOMEP00000034730	ENSOMEP00000031166	ATP-binding cassette, sub-family D (ALD), member 4.	ATP-binding cassette, sub-family D (ALD), member 2.	0.937
abcd4	abcd3	ENSOMEP00000034730	ENSOMEP00000021945	ATP-binding cassette, sub-family D (ALD), member 4.	ATP-binding cassette, sub-family D (ALD), member 3a.	0.892