STRINGSTRING
LOC112147056 LOC112147056 ENSOMEP00000002887 ENSOMEP00000002887 LOC112152986 LOC112152986 ENSOMEP00000005497 ENSOMEP00000005497 ENSOMEP00000005778 ENSOMEP00000005778 spon2 spon2 pla2g6 pla2g6 LOC112163319 LOC112163319 ENSOMEP00000019574 ENSOMEP00000019574 LGALS4 LGALS4 ENSOMEP00000027342 ENSOMEP00000027342 meltf meltf ENSOMEP00000028943 ENSOMEP00000028943 fgb fgb
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC112147056Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate. (690 aa)
ENSOMEP00000002887Uncharacterized protein. (221 aa)
LOC112152986Spondin 2a, extracellular matrix protein. (334 aa)
ENSOMEP00000005497Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate. (680 aa)
ENSOMEP00000005778Thymosin beta; Plays an important role in the organization of the cytoskeleton. Binds to and sequesters actin monomers (G actin) and therefore inhibits actin polymerization. Belongs to the thymosin beta family. (43 aa)
spon2Spondin 2b, extracellular matrix protein. (338 aa)
pla2g6Phospholipase A2, group VI (cytosolic, calcium-independent). (820 aa)
LOC112163319Phospholipase A(2). (149 aa)
ENSOMEP00000019574Galectin. (148 aa)
LGALS4Galectin. (257 aa)
ENSOMEP00000027342Uncharacterized protein. (67 aa)
meltfSerotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate. (725 aa)
ENSOMEP00000028943Thymosin beta 2. (44 aa)
fgbFibrinogen beta chain. (498 aa)
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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