3 items (Oryzias melastigma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC112154003	Uncharacterized protein. (377 aa)
	gna12	G protein subunit alpha 12. (385 aa)
	LOC112157938	Guanine nucleotide binding protein (G protein), alpha 13b. (378 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC112154003	LOC112157938	ENSOMEP00000005979	ENSOMEP00000002189	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha 13b.	0.972
LOC112154003	gna12	ENSOMEP00000005979	ENSOMEP00000020374	Uncharacterized protein.	G protein subunit alpha 12.	0.892
LOC112157938	LOC112154003	ENSOMEP00000002189	ENSOMEP00000005979	Guanine nucleotide binding protein (G protein), alpha 13b.	Uncharacterized protein.	0.972
LOC112157938	gna12	ENSOMEP00000002189	ENSOMEP00000020374	Guanine nucleotide binding protein (G protein), alpha 13b.	G protein subunit alpha 12.	0.900
gna12	LOC112154003	ENSOMEP00000020374	ENSOMEP00000005979	G protein subunit alpha 12.	Uncharacterized protein.	0.892
gna12	LOC112157938	ENSOMEP00000020374	ENSOMEP00000002189	G protein subunit alpha 12.	Guanine nucleotide binding protein (G protein), alpha 13b.	0.900