STRINGSTRING
ube2k ube2k LOC112152455 LOC112152455 ENSOMEP00000004295 ENSOMEP00000004295 ENSOMEP00000002594 ENSOMEP00000002594 ABI1 ABI1 ENSOMEP00000000231 ENSOMEP00000000231 ENSOMEP00000013361 ENSOMEP00000013361 fmr1 fmr1 LOC112162229 LOC112162229 LOC112153588 LOC112153588 LOC112147694 LOC112147694 LOC112156928 LOC112156928 ENSOMEP00000029668 ENSOMEP00000029668
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ube2kUbiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
LOC112152455Calcium and integrin binding 1 (calmyrin). (197 aa)
ENSOMEP00000004295Uncharacterized protein. (118 aa)
ENSOMEP00000002594Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1309 aa)
ABI1Abl-interactor 1a. (407 aa)
ENSOMEP00000000231Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1560 aa)
ENSOMEP00000013361Actin binding transcription modulator. (203 aa)
fmr1Fragile X mental retardation 1. (625 aa)
LOC112162229MORN repeat containing 4. (146 aa)
LOC112153588Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
LOC112147694Abl-interactor 1b. (496 aa)
LOC112156928Uncharacterized protein. (145 aa)
ENSOMEP00000029668AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (923 aa)
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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