STRINGSTRING
LOC112136593 LOC112136593 pou6f1 pou6f1 ENSOMEP00000025442 ENSOMEP00000025442 LOC112163250 LOC112163250 ENSOMEP00000023058 ENSOMEP00000023058 LOC112148176 LOC112148176 med10 med10 TBX2 TBX2 tbx3 tbx3 foxn4 foxn4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC112136593Mothers against decapentaplegic homolog. (536 aa)
pou6f1POU domain protein. (616 aa)
ENSOMEP00000025442Uncharacterized protein. (200 aa)
LOC112163250T-box transcription factor 5a. (525 aa)
ENSOMEP00000023058Mothers against decapentaplegic homolog. (493 aa)
LOC112148176Mothers against decapentaplegic homolog. (510 aa)
med10Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (134 aa)
TBX2T-box transcription factor 2. (682 aa)
tbx3T-box transcription factor 3a. (718 aa)
foxn4Forkhead box N4. (514 aa)
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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