(42 nodes) Chemorepellent activity network (Oryzias melastigma)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC112152913	Sema domain-containing protein; Belongs to the semaphorin family. (834 aa)
	sema3e	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E; Belongs to the semaphorin family. (783 aa)
	LOC112162085	Sema domain-containing protein; Belongs to the semaphorin family. (817 aa)
	SEMA4F	Ssemaphorin 4F; Belongs to the semaphorin family. (832 aa)
	sema6d	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like; Belongs to the semaphorin family. (1109 aa)
	cep85	Centrosomal protein 85. (788 aa)
	LOC112136614	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family. (1085 aa)
	LOC112161149	Uncharacterized protein; Belongs to the semaphorin family. (622 aa)
	sema6a	Semaphorin 6A; Belongs to the semaphorin family. (1017 aa)
	LOC112147595	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba; Belongs to the semaphorin family. (901 aa)
	LOC112145639	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. (789 aa)
	LOC112159532	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga; Belongs to the semaphorin family. (742 aa)
	sema3d	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D; Belongs to the semaphorin family. (795 aa)
	sema3g	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl; Belongs to the semaphorin family. (775 aa)
	SEMA4G	Semaphorin 4G; Belongs to the semaphorin family. (886 aa)
	ENSOMEP00000004501	Uncharacterized protein; Belongs to the semaphorin family. (782 aa)
	ENSOMEP00000005032	Semaphorin 7A; Belongs to the semaphorin family. (350 aa)
	sema3b	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B; Belongs to the semaphorin family. (803 aa)
	LOC112152372	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family. (796 aa)
	LOC112159662	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H; Belongs to the semaphorin family. (762 aa)
	SEMA4D	Semaphorin 4D; Belongs to the semaphorin family. (904 aa)
	ENSOMEP00000009476	Sema domain-containing protein; Belongs to the semaphorin family. (1092 aa)
	LOC112150975	Sema domain-containing protein. (1078 aa)
	cep85l	Centrosomal protein 85, like. (774 aa)
	LOC112160832	Sema domain-containing protein; Belongs to the semaphorin family. (837 aa)
	LOC112158056	Fibronectin leucine rich transmembrane protein 2. (658 aa)
	sema5b	Sema domain-containing protein. (1120 aa)
	ENSOMEP00000016094	EGF-like domain-containing protein. (474 aa)
	LOC112136554	Si:ch211-113g11.6; Belongs to the semaphorin family. (638 aa)
	LOC112149208	Fibronectin leucine rich transmembrane protein 2. (653 aa)
	sema4c	Uncharacterized protein; Belongs to the semaphorin family. (864 aa)
	LOC112147599	Semaphorin 4e; Belongs to the semaphorin family. (768 aa)
	flrt3	Fibronectin leucine rich transmembrane 3. (650 aa)
	LOC112152745	Semaphorin 7A; Belongs to the semaphorin family. (648 aa)
	LOC112145377	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family. (796 aa)
	LOC112150085	Si:ch211-129c21.1; Belongs to the semaphorin family. (808 aa)
	LOC112145792	Si:dkey-49n23.1; Belongs to the semaphorin family. (804 aa)
	sema3c	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C; Belongs to the semaphorin family. (764 aa)
	LOC112154644	Uncharacterized protein; Belongs to the semaphorin family. (887 aa)
	LOC112150887	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb; Belongs to the semaphorin family. (961 aa)
	LOC112154247	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family. (845 aa)
	LOC112136788	Sema domain-containing protein. (1085 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOMEP00000004501	ENSOMEP00000009476	ENSOMEP00000004501	ENSOMEP00000009476	Uncharacterized protein; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.410
ENSOMEP00000004501	LOC112136614	ENSOMEP00000004501	ENSOMEP00000032760	Uncharacterized protein; Belongs to the semaphorin family.	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family.	0.410
ENSOMEP00000004501	LOC112147595	ENSOMEP00000004501	ENSOMEP00000033653	Uncharacterized protein; Belongs to the semaphorin family.	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba; Belongs to the semaphorin family.	0.413
ENSOMEP00000004501	LOC112147599	ENSOMEP00000004501	ENSOMEP00000018277	Uncharacterized protein; Belongs to the semaphorin family.	Semaphorin 4e; Belongs to the semaphorin family.	0.552
ENSOMEP00000004501	LOC112150887	ENSOMEP00000004501	ENSOMEP00000025235	Uncharacterized protein; Belongs to the semaphorin family.	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb; Belongs to the semaphorin family.	0.413
ENSOMEP00000004501	sema6a	ENSOMEP00000004501	ENSOMEP00000033594	Uncharacterized protein; Belongs to the semaphorin family.	Semaphorin 6A; Belongs to the semaphorin family.	0.410
ENSOMEP00000004501	sema6d	ENSOMEP00000004501	ENSOMEP00000027681	Uncharacterized protein; Belongs to the semaphorin family.	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like; Belongs to the semaphorin family.	0.410
ENSOMEP00000009476	ENSOMEP00000004501	ENSOMEP00000009476	ENSOMEP00000004501	Sema domain-containing protein; Belongs to the semaphorin family.	Uncharacterized protein; Belongs to the semaphorin family.	0.410
ENSOMEP00000009476	LOC112152913	ENSOMEP00000009476	ENSOMEP00000036095	Sema domain-containing protein; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.410
ENSOMEP00000009476	LOC112160832	ENSOMEP00000009476	ENSOMEP00000011951	Sema domain-containing protein; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.410
ENSOMEP00000009476	LOC112162085	ENSOMEP00000009476	ENSOMEP00000026732	Sema domain-containing protein; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.410
ENSOMEP00000009476	SEMA4D	ENSOMEP00000009476	ENSOMEP00000007039	Sema domain-containing protein; Belongs to the semaphorin family.	Semaphorin 4D; Belongs to the semaphorin family.	0.430
LOC112136614	ENSOMEP00000004501	ENSOMEP00000032760	ENSOMEP00000004501	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family.	Uncharacterized protein; Belongs to the semaphorin family.	0.410
LOC112136614	LOC112152913	ENSOMEP00000032760	ENSOMEP00000036095	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.410
LOC112136614	LOC112160832	ENSOMEP00000032760	ENSOMEP00000011951	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.410
LOC112136614	LOC112162085	ENSOMEP00000032760	ENSOMEP00000026732	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.410
LOC112136614	SEMA4D	ENSOMEP00000032760	ENSOMEP00000007039	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family.	Semaphorin 4D; Belongs to the semaphorin family.	0.430
LOC112147595	ENSOMEP00000004501	ENSOMEP00000033653	ENSOMEP00000004501	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba; Belongs to the semaphorin family.	Uncharacterized protein; Belongs to the semaphorin family.	0.413
LOC112147595	LOC112152913	ENSOMEP00000033653	ENSOMEP00000036095	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.410
LOC112147595	LOC112160832	ENSOMEP00000033653	ENSOMEP00000011951	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.410