(23 nodes) Positive regulation of filopodium assembly network (Oryzias melastigma)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC112142527	Dihydropyrimidinase like 3. (656 aa)
	ENSOMEP00000000231	Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1560 aa)
	ENSOMEP00000002594	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1309 aa)
	CDC42	Cell division cycle 42. (191 aa)
	gpm6a	Glycoprotein M6Aa. (278 aa)
	fnbp1l	Formin binding protein 1-like. (568 aa)
	ripor2	RHO family interacting cell polarization regulator 2. (1100 aa)
	LOC112143725	Uncharacterized protein. (191 aa)
	LOC112137131	Uncharacterized protein. (191 aa)
	fmr1	Fragile X mental retardation 1. (625 aa)
	nrp1	Neuropilin; Belongs to the neuropilin family. (930 aa)
	LOC112146245	Selenoprotein W, 2b. (94 aa)
	ENSOMEP00000021669	Uncharacterized protein. (57 aa)
	LOC112144774	Cell division cycle 42. (191 aa)
	ENSOMEP00000023220	RIPOR family member 3. (858 aa)
	ENSOMEP00000026281	MADS-box domain-containing protein. (470 aa)
	ENSOMEP00000027285	Uncharacterized protein. (250 aa)
	tenm1	Teneurin transmembrane protein 1. (2761 aa)
	ENSOMEP00000031446	Agrin. (1934 aa)
	palm	Paralemmin 1b. (227 aa)
	srf	Serum response factor b. (588 aa)
	ENSOMEP00000036011	BCAS3 microtubule associated cell migration factor. (498 aa)
	LOC112139281	Uncharacterized protein. (176 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	ENSOMEP00000000231	ENSOMEP00000003168	ENSOMEP00000000231	Cell division cycle 42.	Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.666
CDC42	ENSOMEP00000002594	ENSOMEP00000003168	ENSOMEP00000002594	Cell division cycle 42.	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.666
CDC42	LOC112137131	ENSOMEP00000003168	ENSOMEP00000014906	Cell division cycle 42.	Uncharacterized protein.	0.628
CDC42	LOC112139281	ENSOMEP00000003168	ENSOMEP00000036040	Cell division cycle 42.	Uncharacterized protein.	0.628
CDC42	LOC112143725	ENSOMEP00000003168	ENSOMEP00000012109	Cell division cycle 42.	Uncharacterized protein.	0.860
CDC42	fnbp1l	ENSOMEP00000003168	ENSOMEP00000010980	Cell division cycle 42.	Formin binding protein 1-like.	0.812
ENSOMEP00000000231	CDC42	ENSOMEP00000000231	ENSOMEP00000003168	Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Cell division cycle 42.	0.666
ENSOMEP00000000231	ENSOMEP00000002594	ENSOMEP00000000231	ENSOMEP00000002594	Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.688
ENSOMEP00000000231	LOC112137131	ENSOMEP00000000231	ENSOMEP00000014906	Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.666
ENSOMEP00000000231	LOC112139281	ENSOMEP00000000231	ENSOMEP00000036040	Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.666
ENSOMEP00000000231	LOC112143725	ENSOMEP00000000231	ENSOMEP00000012109	Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.666
ENSOMEP00000000231	LOC112144774	ENSOMEP00000000231	ENSOMEP00000021874	Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Cell division cycle 42.	0.666
ENSOMEP00000002594	CDC42	ENSOMEP00000002594	ENSOMEP00000003168	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Cell division cycle 42.	0.666
ENSOMEP00000002594	ENSOMEP00000000231	ENSOMEP00000002594	ENSOMEP00000000231	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.688
ENSOMEP00000002594	LOC112137131	ENSOMEP00000002594	ENSOMEP00000014906	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.666
ENSOMEP00000002594	LOC112139281	ENSOMEP00000002594	ENSOMEP00000036040	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.666
ENSOMEP00000002594	LOC112143725	ENSOMEP00000002594	ENSOMEP00000012109	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.666
ENSOMEP00000002594	LOC112144774	ENSOMEP00000002594	ENSOMEP00000021874	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Cell division cycle 42.	0.666
ENSOMEP00000026281	srf	ENSOMEP00000026281	ENSOMEP00000032748	MADS-box domain-containing protein.	Serum response factor b.	0.894
ENSOMEP00000031446	tenm1	ENSOMEP00000031446	ENSOMEP00000030112	Agrin.	Teneurin transmembrane protein 1.	0.462