STRINGSTRING
lrrc45 lrrc45 gabra1 gabra1 gabrg2 gabrg2 gabrg1 gabrg1 gabbr2 gabbr2 GABRA2 GABRA2 gabra4 gabra4 LOC112136620 LOC112136620 gabra5 gabra5 GABRG3 GABRG3 LOC112142612 LOC112142612 GABRG3-2 GABRG3-2 LOC112160023 LOC112160023 ENSOMEP00000024914 ENSOMEP00000024914 ENSOMEP00000025414 ENSOMEP00000025414 ENSOMEP00000025931 ENSOMEP00000025931 GABBR1 GABBR1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lrrc45Leucine rich repeat containing 45. (673 aa)
gabra1Gamma-aminobutyric acid (GABA) A receptor, alpha 1; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (461 aa)
gabrg2Gamma-aminobutyric acid (GABA) A receptor, gamma 2; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (475 aa)
gabrg1Gamma-aminobutyric acid type A receptor gamma1 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (460 aa)
gabbr2Gamma-aminobutyric acid (GABA) B receptor, 2. (937 aa)
GABRA2Gamma-aminobutyric acid type A receptor alpha2 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (455 aa)
gabra4Gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (554 aa)
LOC112136620Gamma-aminobutyric acid (GABA) B receptor, 1a. (992 aa)
gabra5Gamma-aminobutyric acid type A receptor alpha5 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (459 aa)
GABRG3Gamma-aminobutyric acid type A receptor gamma3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (451 aa)
LOC112142612Gamma-aminobutyric acid (GABA) A receptor, alpha 6b; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (474 aa)
GABRG3-2Gamma-aminobutyric acid type A receptor gamma3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (448 aa)
LOC112160023Gamma-aminobutyric acid type A receptor alpha5 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (467 aa)
ENSOMEP00000024914C2H2-type domain-containing protein. (513 aa)
ENSOMEP00000025414Gamma-aminobutyric acid (GABA) A receptor, alpha 6a; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (167 aa)
ENSOMEP00000025931Gamma-aminobutyric acid (GABA) A receptor, alpha 3; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (307 aa)
GABBR1Gamma-aminobutyric acid (GABA) B receptor, 1b. (860 aa)
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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