25 items (Oryzias melastigma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC112155664	ANK_REP_REGION domain-containing protein. (387 aa)
	rae1	Ribonucleic acid export 1. (368 aa)
	drg1	Developmentally regulated GTP binding protein 1. (366 aa)
	fsd1	Fibronectin type III and SPRY domain containing 1. (497 aa)
	ENSOMEP00000001805	Uncharacterized protein. (1743 aa)
	LOC112158166	Uncharacterized protein. (354 aa)
	LOC112161116	Centriole, cilia and spindle-associated protein b. (314 aa)
	ENSOMEP00000004937	Translocated promoter region b, nuclear basket protein. (2245 aa)
	kif15	Kinesin family member 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1392 aa)
	LOC112136804	SAS-6 centriolar assembly protein. (581 aa)
	ENSOMEP00000007512	Dynactin 1b. (1259 aa)
	ENSOMEP00000008048	Uncharacterized protein. (692 aa)
	LOC112152429	Uncharacterized protein. (354 aa)
	cep97	Centrosomal protein 97. (754 aa)
	LOC112139527	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1680 aa)
	LOC112148239	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1686 aa)
	ENSOMEP00000015665	Uncharacterized protein. (311 aa)
	LOC112153358	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1763 aa)
	tpx2	TPX2 microtubule nucleation factor. (703 aa)
	LOC112155703	Dynactin 1a. (1268 aa)
	stil	STIL centriolar assembly protein. (1125 aa)
	bora	Bora aurora kinase A activator. (546 aa)
	ENSOMEP00000029783	PLAT domain-containing protein. (260 aa)
	parp3	Poly [ADP-ribose] polymerase. (530 aa)
	ENSOMEP00000035194	Uncharacterized protein. (666 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOMEP00000001805	ENSOMEP00000007512	ENSOMEP00000001805	ENSOMEP00000007512	Uncharacterized protein.	Dynactin 1b.	0.473
ENSOMEP00000001805	ENSOMEP00000008048	ENSOMEP00000001805	ENSOMEP00000008048	Uncharacterized protein.	Uncharacterized protein.	0.941
ENSOMEP00000001805	ENSOMEP00000035194	ENSOMEP00000001805	ENSOMEP00000035194	Uncharacterized protein.	Uncharacterized protein.	0.961
ENSOMEP00000001805	LOC112155703	ENSOMEP00000001805	ENSOMEP00000023943	Uncharacterized protein.	Dynactin 1a.	0.473
ENSOMEP00000001805	rae1	ENSOMEP00000001805	ENSOMEP00000000106	Uncharacterized protein.	Ribonucleic acid export 1.	0.445
ENSOMEP00000004937	rae1	ENSOMEP00000004937	ENSOMEP00000000106	Translocated promoter region b, nuclear basket protein.	Ribonucleic acid export 1.	0.856
ENSOMEP00000007512	ENSOMEP00000001805	ENSOMEP00000007512	ENSOMEP00000001805	Dynactin 1b.	Uncharacterized protein.	0.473
ENSOMEP00000007512	kif15	ENSOMEP00000007512	ENSOMEP00000005239	Dynactin 1b.	Kinesin family member 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.660
ENSOMEP00000008048	ENSOMEP00000001805	ENSOMEP00000008048	ENSOMEP00000001805	Uncharacterized protein.	Uncharacterized protein.	0.941
ENSOMEP00000008048	LOC112152429	ENSOMEP00000008048	ENSOMEP00000008902	Uncharacterized protein.	Uncharacterized protein.	0.788
ENSOMEP00000008048	LOC112158166	ENSOMEP00000008048	ENSOMEP00000003523	Uncharacterized protein.	Uncharacterized protein.	0.788
ENSOMEP00000015665	rae1	ENSOMEP00000015665	ENSOMEP00000000106	Uncharacterized protein.	Ribonucleic acid export 1.	0.856
ENSOMEP00000035194	ENSOMEP00000001805	ENSOMEP00000035194	ENSOMEP00000001805	Uncharacterized protein.	Uncharacterized protein.	0.961
ENSOMEP00000035194	LOC112152429	ENSOMEP00000035194	ENSOMEP00000008902	Uncharacterized protein.	Uncharacterized protein.	0.793
ENSOMEP00000035194	LOC112158166	ENSOMEP00000035194	ENSOMEP00000003523	Uncharacterized protein.	Uncharacterized protein.	0.793
LOC112136804	parp3	ENSOMEP00000007474	ENSOMEP00000029921	SAS-6 centriolar assembly protein.	Poly [ADP-ribose] polymerase.	0.595
LOC112136804	stil	ENSOMEP00000007474	ENSOMEP00000025617	SAS-6 centriolar assembly protein.	STIL centriolar assembly protein.	0.820
LOC112139527	LOC112148239	ENSOMEP00000009745	ENSOMEP00000015499	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.930
LOC112148239	LOC112139527	ENSOMEP00000015499	ENSOMEP00000009745	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.930
LOC112148239	LOC112153358	ENSOMEP00000015499	ENSOMEP00000016088	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.912