(6 nodes) Morphogenesis of an epithelial fold network (Oryzias melastigma)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSOMEP00000034091	CTCK domain-containing protein. (204 aa)
	LOC112139901	Androgen receptor. (718 aa)
	LOC112153467	Uncharacterized protein. (678 aa)
	LOC112138144	Sclerostin domain containing 1b. (188 aa)
	ENSOMEP00000019898	Bromo domain-containing protein. (1064 aa)
	ENSOMEP00000023763	Sclerostin domain containing 1a. (214 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOMEP00000019898	LOC112139901	ENSOMEP00000019898	ENSOMEP00000004685	Bromo domain-containing protein.	Androgen receptor.	0.411
ENSOMEP00000019898	LOC112153467	ENSOMEP00000019898	ENSOMEP00000012388	Bromo domain-containing protein.	Uncharacterized protein.	0.411
LOC112139901	ENSOMEP00000019898	ENSOMEP00000004685	ENSOMEP00000019898	Androgen receptor.	Bromo domain-containing protein.	0.411
LOC112139901	LOC112153467	ENSOMEP00000004685	ENSOMEP00000012388	Androgen receptor.	Uncharacterized protein.	0.897
LOC112153467	ENSOMEP00000019898	ENSOMEP00000012388	ENSOMEP00000019898	Uncharacterized protein.	Bromo domain-containing protein.	0.411
LOC112153467	LOC112139901	ENSOMEP00000012388	ENSOMEP00000004685	Uncharacterized protein.	Androgen receptor.	0.897