STRINGSTRING
tnip1 tnip1 LOC112155583 LOC112155583 zc3h12a zc3h12a sart3 sart3 LOC112143100 LOC112143100 LOC112137531 LOC112137531 LOC112149806 LOC112149806 LOC112149431 LOC112149431 wdr20 wdr20
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tnip1TNFAIP3 interacting protein 1. (650 aa)
LOC112155583TRAF family member-associated NFKB activator. (342 aa)
zc3h12aSi:dkey-206d17.12. (568 aa)
sart3Spliceosome associated factor 3, U4/U6 recycling protein. (944 aa)
LOC112143100Zinc finger CCCH-type containing 12A. (623 aa)
LOC112137531WD_REPEATS_REGION domain-containing protein. (610 aa)
LOC112149806DM1 locus, WD repeat containing. (688 aa)
LOC112149431Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (463 aa)
wdr20WD repeat domain 20a. (613 aa)
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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