STRINGSTRING
fgf16 fgf16 LOC112162837 LOC112162837 LOC112150729 LOC112150729 LOC112153795 LOC112153795 met met lgmn lgmn ENSOMEP00000021604 ENSOMEP00000021604 LOC112145561 LOC112145561 vegfa vegfa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fgf16Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (217 aa)
LOC112162837Heat shock protein, alpha-crystallin-related, b15; Belongs to the small heat shock protein (HSP20) family. (198 aa)
LOC112150729Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (210 aa)
LOC112153795Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family. (210 aa)
metMET proto-oncogene, receptor tyrosine kinase. (1398 aa)
lgmnLegumain. (434 aa)
ENSOMEP00000021604Macrophage stimulating 1 receptor b. (1374 aa)
LOC112145561Macrophage stimulating 1 receptor a. (1366 aa)
vegfaVascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (214 aa)
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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