49 items (Oryzias melastigma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC112142786	Kinesin family member 4; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1253 aa)
	ENSOMEP00000007578	Uncharacterized protein. (450 aa)
	LOC112152429	Uncharacterized protein. (354 aa)
	cenpf	Centromere protein F. (2843 aa)
	LOC112144555	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a. (355 aa)
	TTC28	Tetratricopeptide repeat domain 28. (2438 aa)
	ENSOMEP00000009897	ADP-ribosylation factor 6a. (118 aa)
	mitd1	MIT, microtubule interacting and transport, domain containing 1. (246 aa)
	LOC112143725	Uncharacterized protein. (191 aa)
	nudc	NudC nuclear distribution protein. (334 aa)
	LOC112137131	Uncharacterized protein. (191 aa)
	hepacam2	HEPACAM family member 2. (457 aa)
	LOC112141042	TPR_REGION domain-containing protein. (128 aa)
	spast	Spastin; Belongs to the AAA ATPase family. (471 aa)
	LOC112139281	Uncharacterized protein. (176 aa)
	agbl5	ATP/GTP binding protein-like 5. (930 aa)
	ENSOMEP00000020411	Zinc finger, FYVE domain containing 26. (2162 aa)
	ENSOMEP00000021643	Uncharacterized protein. (411 aa)
	LOC112144774	Cell division cycle 42. (191 aa)
	LOC112145165	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b. (355 aa)
	lzts2	Leucine zipper putative tumor suppressor 2 homolog; Negative regulator of katanin-mediated microtubule severing and release from the centrosome. Required for central spindle formation and the completion of cytokinesis. Negative regulator of the Wnt signaling pathway. Represses beta-catenin-mediated transcriptional activation by promoting the nuclear exclusion of beta-catenin. Belongs to the LZTS2 family. (696 aa)
	ddx11	DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11. (896 aa)
	ENSOMEP00000026368	Microtubule crosslinking factor 1. (489 aa)
	ENSOMEP00000026375	Uncharacterized protein. (155 aa)
	ankrd54	Ankyrin repeat domain 54. (313 aa)
	pdcd6ip	Programmed cell death 6 interacting protein. (873 aa)
	SCCPDH	Saccharopine dehydrogenase a, tandem duplicate 1. (427 aa)
	LOC112157790	Uncharacterized protein. (426 aa)
	YPEL5	Protein yippee-like; Belongs to the yippee family. (121 aa)
	LOC112158719	Baculoviral IAP repeat containing 5b. (167 aa)
	sirt2	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (376 aa)
	ist1	IST1 factor associated with ESCRT-III. (346 aa)
	ENSOMEP00000033614	UBIQUITIN_CONJUGAT_2 domain-containing protein. (176 aa)
	ENSOMEP00000034029	Kinesin family member 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1286 aa)
	ENSOMEP00000034218	Leucine zipper, putative tumor suppressor family member 3b. (1056 aa)
	exoc7	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (725 aa)
	ENSOMEP00000035303	Pellino E3 ubiquitin protein ligase family member 2. (419 aa)
	LOC112158055	Protein yippee-like; Belongs to the yippee family. (120 aa)
	ENSOMEP00000035420	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (163 aa)
	cep55	Centrosomal protein 55 like. (488 aa)
	ENSOMEP00000036006	TPR_REGION domain-containing protein. (140 aa)
	ENSOMEP00000000292	Baculoviral IAP repeat containing 6. (4149 aa)
	LOC112149662	Spartin b. (596 aa)
	CDC42	Cell division cycle 42. (191 aa)
	LOC112158166	Uncharacterized protein. (354 aa)
	LOC112161508	EABR domain-containing protein. (416 aa)
	LOC112154285	Baculoviral IAP repeat containing 5a. (142 aa)
	tbck	TBC1 domain containing kinase. (887 aa)
	cunh6orf89	Zgc:162255. (332 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	ENSOMEP00000009897	ENSOMEP00000003168	ENSOMEP00000009897	Cell division cycle 42.	ADP-ribosylation factor 6a.	0.569
CDC42	ENSOMEP00000021643	ENSOMEP00000003168	ENSOMEP00000021643	Cell division cycle 42.	Uncharacterized protein.	0.410
CDC42	ENSOMEP00000035420	ENSOMEP00000003168	ENSOMEP00000035420	Cell division cycle 42.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.569
CDC42	ENSOMEP00000036006	ENSOMEP00000003168	ENSOMEP00000036006	Cell division cycle 42.	TPR_REGION domain-containing protein.	0.410
CDC42	LOC112137131	ENSOMEP00000003168	ENSOMEP00000014906	Cell division cycle 42.	Uncharacterized protein.	0.628
CDC42	LOC112139281	ENSOMEP00000003168	ENSOMEP00000036040	Cell division cycle 42.	Uncharacterized protein.	0.628
CDC42	LOC112141042	ENSOMEP00000003168	ENSOMEP00000017348	Cell division cycle 42.	TPR_REGION domain-containing protein.	0.410
CDC42	LOC112143725	ENSOMEP00000003168	ENSOMEP00000012109	Cell division cycle 42.	Uncharacterized protein.	0.860
CDC42	LOC112144555	ENSOMEP00000003168	ENSOMEP00000009269	Cell division cycle 42.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.	0.442
CDC42	LOC112145165	ENSOMEP00000003168	ENSOMEP00000022557	Cell division cycle 42.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.	0.442
CDC42	LOC112152429	ENSOMEP00000003168	ENSOMEP00000008902	Cell division cycle 42.	Uncharacterized protein.	0.442
CDC42	LOC112158166	ENSOMEP00000003168	ENSOMEP00000003523	Cell division cycle 42.	Uncharacterized protein.	0.442
CDC42	TTC28	ENSOMEP00000003168	ENSOMEP00000009771	Cell division cycle 42.	Tetratricopeptide repeat domain 28.	0.410
CDC42	exoc7	ENSOMEP00000003168	ENSOMEP00000034341	Cell division cycle 42.	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.834
ENSOMEP00000000292	ENSOMEP00000021643	ENSOMEP00000000292	ENSOMEP00000021643	Baculoviral IAP repeat containing 6.	Uncharacterized protein.	0.520
ENSOMEP00000000292	ENSOMEP00000033614	ENSOMEP00000000292	ENSOMEP00000033614	Baculoviral IAP repeat containing 6.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.989
ENSOMEP00000000292	ENSOMEP00000034218	ENSOMEP00000000292	ENSOMEP00000034218	Baculoviral IAP repeat containing 6.	Leucine zipper, putative tumor suppressor family member 3b.	0.408
ENSOMEP00000000292	ENSOMEP00000035303	ENSOMEP00000000292	ENSOMEP00000035303	Baculoviral IAP repeat containing 6.	Pellino E3 ubiquitin protein ligase family member 2.	0.410
ENSOMEP00000000292	ENSOMEP00000036006	ENSOMEP00000000292	ENSOMEP00000036006	Baculoviral IAP repeat containing 6.	TPR_REGION domain-containing protein.	0.520
ENSOMEP00000000292	LOC112141042	ENSOMEP00000000292	ENSOMEP00000017348	Baculoviral IAP repeat containing 6.	TPR_REGION domain-containing protein.	0.520