13 items (Oryzias melastigma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSOMEP00000029339	Si:ch211-214j8.1. (732 aa)
	LOC112160530	Si:dkeyp-86f7.4. (359 aa)
	LOC112142813	Ring finger protein 167. (396 aa)
	folh1b	N-acetylated alpha-linked acidic dipeptidase 2. (739 aa)
	LOC112151523	Transferrin receptor 1b. (770 aa)
	LOC112156483	Ring finger protein 150b. (446 aa)
	LOC112162819	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (832 aa)
	rnf13	Ring finger protein 13. (376 aa)
	sppl2a	PA domain-containing protein. (536 aa)
	sppl2b	Signal peptide peptidase-like 2. (553 aa)
	LOC112147141	Transferrin receptor 1a. (769 aa)
	edem3	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (886 aa)
	rnf130	Ring finger protein 130. (420 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC112147141	LOC112151523	ENSOMEP00000006931	ENSOMEP00000021868	Transferrin receptor 1a.	Transferrin receptor 1b.	0.899
LOC112151523	LOC112147141	ENSOMEP00000021868	ENSOMEP00000006931	Transferrin receptor 1b.	Transferrin receptor 1a.	0.899
LOC112156483	LOC112160530	ENSOMEP00000021428	ENSOMEP00000027612	Ring finger protein 150b.	Si:dkeyp-86f7.4.	0.509
LOC112160530	LOC112156483	ENSOMEP00000027612	ENSOMEP00000021428	Si:dkeyp-86f7.4.	Ring finger protein 150b.	0.509
LOC112160530	rnf130	ENSOMEP00000027612	ENSOMEP00000006471	Si:dkeyp-86f7.4.	Ring finger protein 130.	0.509
LOC112162819	edem3	ENSOMEP00000021012	ENSOMEP00000004159	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.870
edem3	LOC112162819	ENSOMEP00000004159	ENSOMEP00000021012	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.870
rnf130	LOC112160530	ENSOMEP00000006471	ENSOMEP00000027612	Ring finger protein 130.	Si:dkeyp-86f7.4.	0.509