(14 nodes) Plexin, cytoplasmic RasGAP domain network (Oryzias melastigma)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSOMEP00000036108	Uncharacterized protein. (383 aa)
	LOC112152343	Plexin b2b. (1848 aa)
	PLXND1	Plexin D1. (1899 aa)
	PLXNA2	Plexin A2. (1911 aa)
	ENSOMEP00000012136	Plexin b1a. (1941 aa)
	ENSOMEP00000012427	Plexin A1a. (1851 aa)
	LOC112144749	Sema domain-containing protein. (1895 aa)
	LOC112159039	Plexin A2. (1977 aa)
	ENSOMEP00000021351	Plexin_cytopl domain-containing protein. (278 aa)
	ENSOMEP00000021366	Plexin_cytopl domain-containing protein. (290 aa)
	ENSOMEP00000021405	Plexin_cytopl domain-containing protein. (167 aa)
	LOC112145119	Plexin b1b. (2118 aa)
	plxna4	Plexin A4. (1916 aa)
	ENSOMEP00000028349	Plexin_cytopl domain-containing protein. (441 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSOMEP00000021351	ENSOMEP00000021366	Plexin_cytopl domain-containing protein.	Plexin_cytopl domain-containing protein.	0.830
ENSOMEP00000021351	ENSOMEP00000021405	Plexin_cytopl domain-containing protein.	Plexin_cytopl domain-containing protein.	0.607
ENSOMEP00000021366	ENSOMEP00000021351	Plexin_cytopl domain-containing protein.	Plexin_cytopl domain-containing protein.	0.830
ENSOMEP00000021405	ENSOMEP00000021351	Plexin_cytopl domain-containing protein.	Plexin_cytopl domain-containing protein.	0.607
ENSOMEP00000021405	ENSOMEP00000036108	Plexin_cytopl domain-containing protein.	Uncharacterized protein.	0.836
ENSOMEP00000036108	ENSOMEP00000021405	Uncharacterized protein.	Plexin_cytopl domain-containing protein.	0.836