STRINGSTRING
LOC112148478 LOC112148478 LOC112153580 LOC112153580 irf6 irf6 smad9 smad9 LOC112160358 LOC112160358 irf4 irf4 ENSOMEP00000023063 ENSOMEP00000023063 LOC112136593 LOC112136593 smad1 smad1 LOC112159681 LOC112159681 smad7 smad7 SMAD3 SMAD3 LOC112150465 LOC112150465 irf7 irf7 ENSOMEP00000017184 ENSOMEP00000017184 SMAD3-2 SMAD3-2 smad6 smad6 smad2 smad2 irf5 irf5 LOC112148176 LOC112148176 irf9 irf9 ENSOMEP00000023058 ENSOMEP00000023058
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC112148478Mothers against decapentaplegic homolog. (467 aa)
LOC112153580Mothers against decapentaplegic homolog. (464 aa)
irf6Interferon regulatory factor 6. (484 aa)
smad9Mothers against decapentaplegic homolog. (530 aa)
LOC112160358Mothers against decapentaplegic homolog. (495 aa)
irf4Interferon regulatory factor 4a. (461 aa)
ENSOMEP00000023063Interferon regulatory factor 8. (419 aa)
LOC112136593Mothers against decapentaplegic homolog. (536 aa)
smad1Mothers against decapentaplegic homolog. (471 aa)
LOC112159681Interferon regulatory factor 10. (405 aa)
smad7Mothers against decapentaplegic homolog. (375 aa)
SMAD3Mothers against decapentaplegic homolog. (425 aa)
LOC112150465Interferon regulatory factor 4b. (449 aa)
irf7Interferon regulatory factor 7. (420 aa)
ENSOMEP00000017184Interferon regulatory factor 3. (431 aa)
SMAD3-2Mothers against decapentaplegic homolog. (429 aa)
smad6Mothers against decapentaplegic homolog. (485 aa)
smad2Mothers against decapentaplegic homolog. (473 aa)
irf5Interferon regulatory factor 5. (459 aa)
LOC112148176Mothers against decapentaplegic homolog. (510 aa)
irf9Interferon regulatory factor 9. (436 aa)
ENSOMEP00000023058Mothers against decapentaplegic homolog. (493 aa)
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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