(4 nodes) CBP/p300, atypical RING domain superfamily network (Oryzias melastigma)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC112153984	E1A binding protein p300 a. (2690 aa)
	LOC112146043	E1A binding protein p300 b. (2771 aa)
	ENSOMEP00000004505	CREB binding protein a. (2295 aa)
	crebbp	CREB binding protein b. (2411 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOMEP00000004505	LOC112146043	ENSOMEP00000004505	ENSOMEP00000004390	CREB binding protein a.	E1A binding protein p300 b.	0.987
ENSOMEP00000004505	LOC112153984	ENSOMEP00000004505	ENSOMEP00000007732	CREB binding protein a.	E1A binding protein p300 a.	0.987
ENSOMEP00000004505	crebbp	ENSOMEP00000004505	ENSOMEP00000027588	CREB binding protein a.	CREB binding protein b.	0.885
LOC112146043	ENSOMEP00000004505	ENSOMEP00000004390	ENSOMEP00000004505	E1A binding protein p300 b.	CREB binding protein a.	0.987
LOC112146043	crebbp	ENSOMEP00000004390	ENSOMEP00000027588	E1A binding protein p300 b.	CREB binding protein b.	0.988
LOC112153984	ENSOMEP00000004505	ENSOMEP00000007732	ENSOMEP00000004505	E1A binding protein p300 a.	CREB binding protein a.	0.987
LOC112153984	crebbp	ENSOMEP00000007732	ENSOMEP00000027588	E1A binding protein p300 a.	CREB binding protein b.	0.988
crebbp	ENSOMEP00000004505	ENSOMEP00000027588	ENSOMEP00000004505	CREB binding protein b.	CREB binding protein a.	0.885
crebbp	LOC112146043	ENSOMEP00000027588	ENSOMEP00000004390	CREB binding protein b.	E1A binding protein p300 b.	0.988
crebbp	LOC112153984	ENSOMEP00000027588	ENSOMEP00000007732	CREB binding protein b.	E1A binding protein p300 a.	0.988