STRINGSTRING
LOC112154614 LOC112154614 crat crat LOC112152828 LOC112152828 LOC112148122 LOC112148122 LOC112152272 LOC112152272 cpt2 cpt2 LOC112146872 LOC112146872 LOC112162239 LOC112162239 crot crot LOC112162489 LOC112162489 LOC112146686 LOC112146686 CHAT CHAT
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC112154614Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family. (785 aa)
cratCarn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (635 aa)
LOC112152828Carnitine palmitoyltransferase 1B (muscle); Belongs to the carnitine/choline acetyltransferase family. (784 aa)
LOC112148122Zgc:154046; Belongs to the carnitine/choline acetyltransferase family. (628 aa)
LOC112152272Carnitine palmitoyltransferase 1Ab (liver); Belongs to the carnitine/choline acetyltransferase family. (772 aa)
cpt2Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family. (666 aa)
LOC112146872Si:ch211-256m1.8. (1579 aa)
LOC112162239Choline O-acetyltransferase a; Belongs to the carnitine/choline acetyltransferase family. (663 aa)
crotCarnitine O-octanoyltransferase. (612 aa)
LOC112162489Carnitine O-acetyltransferase b. (617 aa)
LOC112146686Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family. (786 aa)
CHATCarn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (633 aa)
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.