(21 nodes) Zinc finger, ZZ-type superfamily network (Oryzias melastigma)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC112148277	ZZ-type domain-containing protein. (453 aa)
	ENSOMEP00000008605	Uncharacterized protein. (912 aa)
	crebbp	CREB binding protein b. (2411 aa)
	ENSOMEP00000027530	Zinc finger, ZZ-type with EF hand domain 1. (2916 aa)
	ENSOMEP00000026742	Mindbomb E3 ubiquitin protein ligase 1. (1036 aa)
	LOC112150133	HECT and RLD domain containing E3 ubiquitin protein ligase 2. (4774 aa)
	ENSOMEP00000016930	Dystrophin. (1085 aa)
	drp2	Dystrophin related protein 2. (875 aa)
	kcmf1	Potassium channel modulatory factor 1. (389 aa)
	mib2	Mindbomb E3 ubiquitin protein ligase 2. (1028 aa)
	LOC112141467	Sequestosome 1. (442 aa)
	ENSOMEP00000006250	ZZ-type domain-containing protein. (433 aa)
	LOC112153984	E1A binding protein p300 a. (2690 aa)
	ENSOMEP00000004718	Dystrobrevin, beta b. (550 aa)
	zswim2	Zinc finger, SWIM-type containing 2. (427 aa)
	tada2b	Transcriptional adapter. (488 aa)
	tada2a	Transcriptional adapter. (445 aa)
	LOC112146043	E1A binding protein p300 b. (2771 aa)
	ENSOMEP00000004505	CREB binding protein a. (2295 aa)
	LOC112158098	Dystrobrevin. (634 aa)
	zzz3	Zinc finger, ZZ-type containing 3. (1044 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOMEP00000004505	ENSOMEP00000027530	ENSOMEP00000004505	ENSOMEP00000027530	CREB binding protein a.	Zinc finger, ZZ-type with EF hand domain 1.	0.438
ENSOMEP00000004505	LOC112146043	ENSOMEP00000004505	ENSOMEP00000004390	CREB binding protein a.	E1A binding protein p300 b.	0.987
ENSOMEP00000004505	LOC112150133	ENSOMEP00000004505	ENSOMEP00000023672	CREB binding protein a.	HECT and RLD domain containing E3 ubiquitin protein ligase 2.	0.410
ENSOMEP00000004505	LOC112153984	ENSOMEP00000004505	ENSOMEP00000007732	CREB binding protein a.	E1A binding protein p300 a.	0.987
ENSOMEP00000004505	crebbp	ENSOMEP00000004505	ENSOMEP00000027588	CREB binding protein a.	CREB binding protein b.	0.885
ENSOMEP00000004718	ENSOMEP00000006250	ENSOMEP00000004718	ENSOMEP00000006250	Dystrobrevin, beta b.	ZZ-type domain-containing protein.	0.521
ENSOMEP00000004718	ENSOMEP00000008605	ENSOMEP00000004718	ENSOMEP00000008605	Dystrobrevin, beta b.	Uncharacterized protein.	0.521
ENSOMEP00000004718	ENSOMEP00000016930	ENSOMEP00000004718	ENSOMEP00000016930	Dystrobrevin, beta b.	Dystrophin.	0.521
ENSOMEP00000004718	drp2	ENSOMEP00000004718	ENSOMEP00000014311	Dystrobrevin, beta b.	Dystrophin related protein 2.	0.521
ENSOMEP00000006250	ENSOMEP00000004718	ENSOMEP00000006250	ENSOMEP00000004718	ZZ-type domain-containing protein.	Dystrobrevin, beta b.	0.521
ENSOMEP00000006250	LOC112158098	ENSOMEP00000006250	ENSOMEP00000035199	ZZ-type domain-containing protein.	Dystrobrevin.	0.524
ENSOMEP00000008605	ENSOMEP00000004718	ENSOMEP00000008605	ENSOMEP00000004718	Uncharacterized protein.	Dystrobrevin, beta b.	0.521
ENSOMEP00000008605	LOC112158098	ENSOMEP00000008605	ENSOMEP00000035199	Uncharacterized protein.	Dystrobrevin.	0.520
ENSOMEP00000016930	ENSOMEP00000004718	ENSOMEP00000016930	ENSOMEP00000004718	Dystrophin.	Dystrobrevin, beta b.	0.521
ENSOMEP00000016930	LOC112158098	ENSOMEP00000016930	ENSOMEP00000035199	Dystrophin.	Dystrobrevin.	0.520
ENSOMEP00000026742	mib2	ENSOMEP00000026742	ENSOMEP00000001496	Mindbomb E3 ubiquitin protein ligase 1.	Mindbomb E3 ubiquitin protein ligase 2.	0.633
ENSOMEP00000027530	ENSOMEP00000004505	ENSOMEP00000027530	ENSOMEP00000004505	Zinc finger, ZZ-type with EF hand domain 1.	CREB binding protein a.	0.438
ENSOMEP00000027530	LOC112146043	ENSOMEP00000027530	ENSOMEP00000004390	Zinc finger, ZZ-type with EF hand domain 1.	E1A binding protein p300 b.	0.496
ENSOMEP00000027530	LOC112153984	ENSOMEP00000027530	ENSOMEP00000007732	Zinc finger, ZZ-type with EF hand domain 1.	E1A binding protein p300 a.	0.496
ENSOMEP00000027530	crebbp	ENSOMEP00000027530	ENSOMEP00000027588	Zinc finger, ZZ-type with EF hand domain 1.	CREB binding protein b.	0.438