13 items (Oryzias melastigma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rnf41	Ring finger protein 41. (318 aa)
	ENSOMEP00000005632	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (483 aa)
	usp8	Ubiquitin specific peptidase 8; Belongs to the peptidase C19 family. (1080 aa)
	LOC112161991	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (479 aa)
	LOC112140352	EGF-like domain-containing protein. (596 aa)
	LOC112153097	Neuregulin 2b. (711 aa)
	LOC112140005	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (480 aa)
	akt1	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (473 aa)
	LOC112138811	Neuregulin 2a. (709 aa)
	LOC112154010	Receptor protein-tyrosine kinase. (1284 aa)
	ENSOMEP00000020966	Ribosomal protein S27a. (183 aa)
	LOC112157322	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (479 aa)
	ENSOMEP00000035400	Ubiquitin-like domain-containing protein. (137 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOMEP00000005632	LOC112140005	ENSOMEP00000005632	ENSOMEP00000015355	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.703
ENSOMEP00000005632	LOC112154010	ENSOMEP00000005632	ENSOMEP00000020095	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Receptor protein-tyrosine kinase.	0.412
ENSOMEP00000005632	LOC112157322	ENSOMEP00000005632	ENSOMEP00000025938	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.714
ENSOMEP00000005632	LOC112161991	ENSOMEP00000005632	ENSOMEP00000010054	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.869
ENSOMEP00000005632	akt1	ENSOMEP00000005632	ENSOMEP00000016747	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.869
ENSOMEP00000005632	usp8	ENSOMEP00000005632	ENSOMEP00000009623	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Ubiquitin specific peptidase 8; Belongs to the peptidase C19 family.	0.662
ENSOMEP00000020966	ENSOMEP00000035400	ENSOMEP00000020966	ENSOMEP00000035400	Ribosomal protein S27a.	Ubiquitin-like domain-containing protein.	0.998
ENSOMEP00000020966	LOC112138811	ENSOMEP00000020966	ENSOMEP00000018482	Ribosomal protein S27a.	Neuregulin 2a.	0.678
ENSOMEP00000020966	LOC112140352	ENSOMEP00000020966	ENSOMEP00000014294	Ribosomal protein S27a.	EGF-like domain-containing protein.	0.678
ENSOMEP00000020966	LOC112153097	ENSOMEP00000020966	ENSOMEP00000014670	Ribosomal protein S27a.	Neuregulin 2b.	0.678
ENSOMEP00000020966	LOC112154010	ENSOMEP00000020966	ENSOMEP00000020095	Ribosomal protein S27a.	Receptor protein-tyrosine kinase.	0.674
ENSOMEP00000020966	rnf41	ENSOMEP00000020966	ENSOMEP00000019631	Ribosomal protein S27a.	Ring finger protein 41.	0.894
ENSOMEP00000020966	usp8	ENSOMEP00000020966	ENSOMEP00000009623	Ribosomal protein S27a.	Ubiquitin specific peptidase 8; Belongs to the peptidase C19 family.	0.968
ENSOMEP00000035400	ENSOMEP00000020966	ENSOMEP00000035400	ENSOMEP00000020966	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.998
ENSOMEP00000035400	LOC112138811	ENSOMEP00000035400	ENSOMEP00000018482	Ubiquitin-like domain-containing protein.	Neuregulin 2a.	0.685
ENSOMEP00000035400	LOC112140352	ENSOMEP00000035400	ENSOMEP00000014294	Ubiquitin-like domain-containing protein.	EGF-like domain-containing protein.	0.685
ENSOMEP00000035400	LOC112153097	ENSOMEP00000035400	ENSOMEP00000014670	Ubiquitin-like domain-containing protein.	Neuregulin 2b.	0.685
ENSOMEP00000035400	LOC112154010	ENSOMEP00000035400	ENSOMEP00000020095	Ubiquitin-like domain-containing protein.	Receptor protein-tyrosine kinase.	0.744
ENSOMEP00000035400	rnf41	ENSOMEP00000035400	ENSOMEP00000019631	Ubiquitin-like domain-containing protein.	Ring finger protein 41.	0.797
ENSOMEP00000035400	usp8	ENSOMEP00000035400	ENSOMEP00000009623	Ubiquitin-like domain-containing protein.	Ubiquitin specific peptidase 8; Belongs to the peptidase C19 family.	0.972