29 items (Oryzias melastigma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC112136477	Hairy-related 8.2. (182 aa)
	dner	Delta/notch-like EGF repeat containing. (753 aa)
	LOC112143174	Uncharacterized protein. (308 aa)
	ENSOMEP00000001427	Neurobeachin b. (2309 aa)
	LOC112140662	Deltex 2, E3 ubiquitin ligase. (635 aa)
	ENSOMEP00000035400	Ubiquitin-like domain-containing protein. (137 aa)
	hes4	Hairy-related 9. (291 aa)
	maml3	Mastermind-like transcriptional coactivator 3. (1142 aa)
	LOC112157261	Uncharacterized protein. (757 aa)
	DTX1	Deltex E3 ubiquitin ligase 1. (638 aa)
	ENSOMEP00000028910	Uncharacterized protein. (84 aa)
	LOC112156380	Deltex 4, E3 ubiquitin ligase a. (775 aa)
	ENSOMEP00000026742	Mindbomb E3 ubiquitin protein ligase 1. (1036 aa)
	neurl1b	Neuralized E3 ubiquitin protein ligase 1B. (573 aa)
	lrba	LPS-responsive vesicle trafficking, beach and anchor containing. (2853 aa)
	ENSOMEP00000020966	Ribosomal protein S27a. (183 aa)
	hes1	Hairy-related 6. (274 aa)
	LOC112157280	Neuralized E3 ubiquitin protein ligase 1Aa. (591 aa)
	hey2	Uncharacterized protein. (264 aa)
	LOC112144968	E3 ubiquitin-protein ligase. (862 aa)
	LOC112144436	Uncharacterized protein. (225 aa)
	ENSOMEP00000012874	E3 ubiquitin-protein ligase. (776 aa)
	hey1	Hes-related family bHLH transcription factor with YRPW motif 1. (330 aa)
	LOC112136272	Hes related family bHLH transcription factor with YRPW motif like. (314 aa)
	ENSOMEP00000010986	Neurobeachin a. (1085 aa)
	ENSOMEP00000010954	Uncharacterized protein. (254 aa)
	DLK1	Delta like non-canonical Notch ligand 1. (392 aa)
	LOC112163451	Notch receptor 1a. (2477 aa)
	ENSOMEP00000008043	Notch receptor 1b. (2317 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DLK1	ENSOMEP00000008043	ENSOMEP00000009247	ENSOMEP00000008043	Delta like non-canonical Notch ligand 1.	Notch receptor 1b.	0.678
DLK1	ENSOMEP00000020966	ENSOMEP00000009247	ENSOMEP00000020966	Delta like non-canonical Notch ligand 1.	Ribosomal protein S27a.	0.401
DLK1	LOC112157280	ENSOMEP00000009247	ENSOMEP00000019006	Delta like non-canonical Notch ligand 1.	Neuralized E3 ubiquitin protein ligase 1Aa.	0.418
DLK1	LOC112163451	ENSOMEP00000009247	ENSOMEP00000008341	Delta like non-canonical Notch ligand 1.	Notch receptor 1a.	0.677
DLK1	neurl1b	ENSOMEP00000009247	ENSOMEP00000026711	Delta like non-canonical Notch ligand 1.	Neuralized E3 ubiquitin protein ligase 1B.	0.418
DTX1	ENSOMEP00000008043	ENSOMEP00000029856	ENSOMEP00000008043	Deltex E3 ubiquitin ligase 1.	Notch receptor 1b.	0.941
DTX1	ENSOMEP00000012874	ENSOMEP00000029856	ENSOMEP00000012874	Deltex E3 ubiquitin ligase 1.	E3 ubiquitin-protein ligase.	0.774
DTX1	ENSOMEP00000020966	ENSOMEP00000029856	ENSOMEP00000020966	Deltex E3 ubiquitin ligase 1.	Ribosomal protein S27a.	0.753
DTX1	ENSOMEP00000035400	ENSOMEP00000029856	ENSOMEP00000035400	Deltex E3 ubiquitin ligase 1.	Ubiquitin-like domain-containing protein.	0.713
DTX1	LOC112144968	ENSOMEP00000029856	ENSOMEP00000014800	Deltex E3 ubiquitin ligase 1.	E3 ubiquitin-protein ligase.	0.774
DTX1	LOC112163451	ENSOMEP00000029856	ENSOMEP00000008341	Deltex E3 ubiquitin ligase 1.	Notch receptor 1a.	0.941
DTX1	dner	ENSOMEP00000029856	ENSOMEP00000002795	Deltex E3 ubiquitin ligase 1.	Delta/notch-like EGF repeat containing.	0.442
ENSOMEP00000001427	ENSOMEP00000010954	ENSOMEP00000001427	ENSOMEP00000010954	Neurobeachin b.	Uncharacterized protein.	0.937
ENSOMEP00000008043	DLK1	ENSOMEP00000008043	ENSOMEP00000009247	Notch receptor 1b.	Delta like non-canonical Notch ligand 1.	0.678
ENSOMEP00000008043	DTX1	ENSOMEP00000008043	ENSOMEP00000029856	Notch receptor 1b.	Deltex E3 ubiquitin ligase 1.	0.941
ENSOMEP00000008043	ENSOMEP00000012874	ENSOMEP00000008043	ENSOMEP00000012874	Notch receptor 1b.	E3 ubiquitin-protein ligase.	0.497
ENSOMEP00000008043	ENSOMEP00000020966	ENSOMEP00000008043	ENSOMEP00000020966	Notch receptor 1b.	Ribosomal protein S27a.	0.559
ENSOMEP00000008043	ENSOMEP00000035400	ENSOMEP00000008043	ENSOMEP00000035400	Notch receptor 1b.	Ubiquitin-like domain-containing protein.	0.564
ENSOMEP00000008043	LOC112136272	ENSOMEP00000008043	ENSOMEP00000011038	Notch receptor 1b.	Hes related family bHLH transcription factor with YRPW motif like.	0.474
ENSOMEP00000008043	LOC112140662	ENSOMEP00000008043	ENSOMEP00000000592	Notch receptor 1b.	Deltex 2, E3 ubiquitin ligase.	0.923