(18 nodes) Vitamin B5 (pantothenate) metabolism network (Oryzias melastigma)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC112150110	Uncharacterized protein. (128 aa)
	LOC112143457	Pantothenate kinase 2. (426 aa)
	LOC112161770	Pantothenate kinase 1a. (448 aa)
	pank4	Pantothenate kinase. (779 aa)
	pdzd11	PDZ domain containing 11. (143 aa)
	ppcs	Phosphopantothenoylcysteine synthetase. (321 aa)
	ENSOMEP00000036015	Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (165 aa)
	LOC112151519	Si:dkey-61p9.11. (2097 aa)
	aasdhppt	Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase. (318 aa)
	ENSOMEP00000002935	Solute carrier family 25 member 16; Belongs to the mitochondrial carrier (TC 2.A.29) family. (323 aa)
	ENSOMEP00000012439	Coiled-coil domain containing 57. (2510 aa)
	dcakd	Dephospho-CoA kinase domain containing. (229 aa)
	coasy	CoA synthase. (550 aa)
	ENSOMEP00000016044	Dynein light chain. (97 aa)
	ENSOMEP00000018728	Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (225 aa)
	ppcdc	Phosphopantothenoylcysteine decarboxylase. (213 aa)
	ENSOMEP00000021901	Carrier domain-containing protein. (1992 aa)
	LOC112151122	Carrier domain-containing protein. (2084 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOMEP00000012439	aasdhppt	ENSOMEP00000012439	ENSOMEP00000001524	Coiled-coil domain containing 57.	Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.	0.941
ENSOMEP00000012439	coasy	ENSOMEP00000012439	ENSOMEP00000012946	Coiled-coil domain containing 57.	CoA synthase.	0.632
ENSOMEP00000012439	dcakd	ENSOMEP00000012439	ENSOMEP00000012862	Coiled-coil domain containing 57.	Dephospho-CoA kinase domain containing.	0.601
ENSOMEP00000018728	pdzd11	ENSOMEP00000018728	ENSOMEP00000031984	Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.	PDZ domain containing 11.	0.758
ENSOMEP00000021901	aasdhppt	ENSOMEP00000021901	ENSOMEP00000001524	Carrier domain-containing protein.	Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.	0.941
ENSOMEP00000021901	coasy	ENSOMEP00000021901	ENSOMEP00000012946	Carrier domain-containing protein.	CoA synthase.	0.632
ENSOMEP00000021901	dcakd	ENSOMEP00000021901	ENSOMEP00000012862	Carrier domain-containing protein.	Dephospho-CoA kinase domain containing.	0.601
ENSOMEP00000036015	pdzd11	ENSOMEP00000036015	ENSOMEP00000031984	Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.	PDZ domain containing 11.	0.758
LOC112143457	LOC112161770	ENSOMEP00000027103	ENSOMEP00000029605	Pantothenate kinase 2.	Pantothenate kinase 1a.	0.926
LOC112143457	coasy	ENSOMEP00000027103	ENSOMEP00000012946	Pantothenate kinase 2.	CoA synthase.	0.970
LOC112143457	dcakd	ENSOMEP00000027103	ENSOMEP00000012862	Pantothenate kinase 2.	Dephospho-CoA kinase domain containing.	0.759
LOC112143457	pank4	ENSOMEP00000027103	ENSOMEP00000030572	Pantothenate kinase 2.	Pantothenate kinase.	0.786
LOC112143457	ppcdc	ENSOMEP00000027103	ENSOMEP00000019965	Pantothenate kinase 2.	Phosphopantothenoylcysteine decarboxylase.	0.944
LOC112143457	ppcs	ENSOMEP00000027103	ENSOMEP00000035083	Pantothenate kinase 2.	Phosphopantothenoylcysteine synthetase.	0.960
LOC112150110	coasy	ENSOMEP00000025864	ENSOMEP00000012946	Uncharacterized protein.	CoA synthase.	0.941
LOC112150110	dcakd	ENSOMEP00000025864	ENSOMEP00000012862	Uncharacterized protein.	Dephospho-CoA kinase domain containing.	0.650
LOC112150110	pank4	ENSOMEP00000025864	ENSOMEP00000030572	Uncharacterized protein.	Pantothenate kinase.	0.675
LOC112150110	ppcdc	ENSOMEP00000025864	ENSOMEP00000019965	Uncharacterized protein.	Phosphopantothenoylcysteine decarboxylase.	0.718
LOC112150110	ppcs	ENSOMEP00000025864	ENSOMEP00000035083	Uncharacterized protein.	Phosphopantothenoylcysteine synthetase.	0.750
LOC112151122	aasdhppt	ENSOMEP00000022007	ENSOMEP00000001524	Carrier domain-containing protein.	Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.	0.941