71 items (Oryzias melastigma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSOMEP00000012190	Uncharacterized protein. (157 aa)
	LOC112148478	Mothers against decapentaplegic homolog. (467 aa)
	snw1	SNW domain containing 1. (564 aa)
	ENSOMEP00000033103	Uncharacterized protein. (597 aa)
	ccnc	Cyclin C; Belongs to the cyclin family. (287 aa)
	ENSOMEP00000032745	MH1 domain-containing protein. (63 aa)
	LOC112149944	Myeloid ecotropic viral integration site 3. (420 aa)
	LOC112159500	Homeobox domain-containing protein. (302 aa)
	ENSOMEP00000032207	Retinoblastoma-like 1 (p107). (1040 aa)
	LOC112145685	Homeobox domain-containing protein. (496 aa)
	ENSOMEP00000031494	Homeobox domain-containing protein. (307 aa)
	irx3	Iroquois homeobox 3a. (421 aa)
	atp1b4	Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family. (342 aa)
	ENSOMEP00000030515	Uncharacterized protein. (309 aa)
	meis2	Meis homeobox 2a. (471 aa)
	irx1	Iroquois homeobox 1b. (431 aa)
	ENSOMEP00000029602	Iroquois homeobox 4b. (365 aa)
	ENSOMEP00000029184	V-ski avian sarcoma viral oncogene homolog a. (486 aa)
	furin	Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family. (835 aa)
	cdk19	Cyclin-dependent kinase 19; Belongs to the protein kinase superfamily. (487 aa)
	ENSOMEP00000028050	Cyclin Q. (160 aa)
	ENSOMEP00000027927	Ubiquitin-like domain-containing protein. (77 aa)
	kxd1	KxDL motif containing 1. (195 aa)
	LOC112147514	Mohawk homeobox b. (387 aa)
	men1	Multiple endocrine neoplasia I. (625 aa)
	LOC112151615	TGFB-induced factor homeobox 1. (301 aa)
	LOC112136593	Mothers against decapentaplegic homolog. (536 aa)
	ENSOMEP00000023058	Mothers against decapentaplegic homolog. (493 aa)
	LOC112148176	Mothers against decapentaplegic homolog. (510 aa)
	ENSOMEP00000021375	Uncharacterized protein. (79 aa)
	ENSOMEP00000020966	Ribosomal protein S27a. (183 aa)
	LOC112145252	V-ski avian sarcoma viral oncogene homolog b. (683 aa)
	ENSOMEP00000019026	Cyclin K; Belongs to the cyclin family. (454 aa)
	smad2	Mothers against decapentaplegic homolog. (473 aa)
	mkx	Mohawk homeobox a. (358 aa)
	e2f4	E2F transcription factor 4. (386 aa)
	SMAD3-2	Mothers against decapentaplegic homolog. (429 aa)
	LOC112146278	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (389 aa)
	LOC112145521	JunB proto-oncogene, AP-1 transcription factor subunit a. (331 aa)
	trim33	Tripartite motif containing 33. (1177 aa)
	ENSOMEP00000014669	Nuclear receptor corepressor 2. (2130 aa)
	ENSOMEP00000014289	Iroquois homeobox 5a. (453 aa)
	irx6	Iroquois homeobox 6a. (467 aa)
	ENSOMEP00000013532	Uncharacterized protein. (98 aa)
	ENSOMEP00000013440	Ubiquitin specific peptidase 9; Belongs to the peptidase C19 family. (2326 aa)
	ENSOMEP00000013193	Cyclin T1; Belongs to the cyclin family. (681 aa)
	LOC112143132	Iroquois homeobox 1a. (498 aa)
	irx2	Iroquois homeobox 2a. (504 aa)
	LOC112143180	Iroquois homeobox 4a. (468 aa)
	skil	SKI-like proto-oncogene a. (751 aa)
	LOC112157656	Meis homeobox 2b. (397 aa)
	ccnt2	Cyclin T2; Belongs to the cyclin family. (685 aa)
	LOC112147850	E2F transcription factor 5. (362 aa)
	ENSOMEP00000010096	c-SKI_SMAD_bind domain-containing protein. (260 aa)
	ENSOMEP00000009385	Nuclear receptor corepressor 1. (2228 aa)
	tfdp1	Transcription factor. (413 aa)
	junb	JunB proto-oncogene, AP-1 transcription factor subunit b. (327 aa)
	mapk1	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (369 aa)
	SMAD3	Mothers against decapentaplegic homolog. (425 aa)
	ENSOMEP00000007753	Uncharacterized protein. (57 aa)
	smad7	Mothers against decapentaplegic homolog. (375 aa)
	ENSOMEP00000006747	Poly [ADP-ribose] polymerase. (395 aa)
	ENSOMEP00000006733	PARP-type domain-containing protein. (104 aa)
	cdk8	Cyclin-dependent kinase 8; Belongs to the protein kinase superfamily. (463 aa)
	nedd4l	NEDD4 like E3 ubiquitin protein ligase. (1220 aa)
	ENSOMEP00000003820	Cyclin-dependent kinase 9 (CDC2-related kinase). (343 aa)
	ENSOMEP00000003060	Cyclin T2b; Belongs to the cyclin family. (551 aa)
	ENSOMEP00000002833	Ubiquitin A-52 residue ribosomal protein fusion product 1. (129 aa)
	LOC112161061	Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family. (810 aa)
	ENSOMEP00000001119	Ring finger protein 111. (981 aa)
	ENSOMEP00000035400	Ubiquitin-like domain-containing protein. (137 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOMEP00000001119	ENSOMEP00000002833	ENSOMEP00000001119	ENSOMEP00000002833	Ring finger protein 111.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.889
ENSOMEP00000001119	ENSOMEP00000006733	ENSOMEP00000001119	ENSOMEP00000006733	Ring finger protein 111.	PARP-type domain-containing protein.	0.439
ENSOMEP00000001119	ENSOMEP00000006747	ENSOMEP00000001119	ENSOMEP00000006747	Ring finger protein 111.	Poly [ADP-ribose] polymerase.	0.439
ENSOMEP00000001119	ENSOMEP00000010096	ENSOMEP00000001119	ENSOMEP00000010096	Ring finger protein 111.	c-SKI_SMAD_bind domain-containing protein.	0.487
ENSOMEP00000001119	ENSOMEP00000020966	ENSOMEP00000001119	ENSOMEP00000020966	Ring finger protein 111.	Ribosomal protein S27a.	0.889
ENSOMEP00000001119	ENSOMEP00000023058	ENSOMEP00000001119	ENSOMEP00000023058	Ring finger protein 111.	Mothers against decapentaplegic homolog.	0.419
ENSOMEP00000001119	ENSOMEP00000027927	ENSOMEP00000001119	ENSOMEP00000027927	Ring finger protein 111.	Ubiquitin-like domain-containing protein.	0.735
ENSOMEP00000001119	ENSOMEP00000029184	ENSOMEP00000001119	ENSOMEP00000029184	Ring finger protein 111.	V-ski avian sarcoma viral oncogene homolog a.	0.487
ENSOMEP00000001119	ENSOMEP00000032745	ENSOMEP00000001119	ENSOMEP00000032745	Ring finger protein 111.	MH1 domain-containing protein.	0.517
ENSOMEP00000001119	ENSOMEP00000035400	ENSOMEP00000001119	ENSOMEP00000035400	Ring finger protein 111.	Ubiquitin-like domain-containing protein.	0.824
ENSOMEP00000001119	LOC112136593	ENSOMEP00000001119	ENSOMEP00000023904	Ring finger protein 111.	Mothers against decapentaplegic homolog.	0.419
ENSOMEP00000001119	LOC112145252	ENSOMEP00000001119	ENSOMEP00000020558	Ring finger protein 111.	V-ski avian sarcoma viral oncogene homolog b.	0.487
ENSOMEP00000001119	LOC112148176	ENSOMEP00000001119	ENSOMEP00000021474	Ring finger protein 111.	Mothers against decapentaplegic homolog.	0.419
ENSOMEP00000001119	LOC112148478	ENSOMEP00000001119	ENSOMEP00000034558	Ring finger protein 111.	Mothers against decapentaplegic homolog.	0.517
ENSOMEP00000001119	LOC112161061	ENSOMEP00000001119	ENSOMEP00000001746	Ring finger protein 111.	Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.	0.497
ENSOMEP00000001119	SMAD3	ENSOMEP00000001119	ENSOMEP00000007833	Ring finger protein 111.	Mothers against decapentaplegic homolog.	0.517
ENSOMEP00000001119	SMAD3-2	ENSOMEP00000001119	ENSOMEP00000018305	Ring finger protein 111.	Mothers against decapentaplegic homolog.	0.517
ENSOMEP00000001119	furin	ENSOMEP00000001119	ENSOMEP00000028743	Ring finger protein 111.	Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.	0.497
ENSOMEP00000001119	skil	ENSOMEP00000001119	ENSOMEP00000010760	Ring finger protein 111.	SKI-like proto-oncogene a.	0.487
ENSOMEP00000001119	smad2	ENSOMEP00000001119	ENSOMEP00000018968	Ring finger protein 111.	Mothers against decapentaplegic homolog.	0.517