23 items (Oryzias melastigma) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	pink1	PTEN induced kinase 1. (577 aa)
	tomm40	Translocase of outer mitochondrial membrane 40 homolog (yeast). (342 aa)
	TOMM7	Translocase of outer mitochondrial membrane 7. (55 aa)
	atg12	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (117 aa)
	ENSOMEP00000001288	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (360 aa)
	vdac1	Voltage-dependent anion channel 1. (283 aa)
	tomm5	Translocase of outer mitochondrial membrane 5 homolog (yeast). (51 aa)
	LOC112141467	Sequestosome 1. (442 aa)
	LOC112157546	Translocase of outer mitochondrial membrane 20b. (146 aa)
	ENSOMEP00000007092	Translocase of outer mitochondrial membrane 22 homolog (yeast). (252 aa)
	ENSOMEP00000035400	Ubiquitin-like domain-containing protein. (137 aa)
	ENSOMEP00000034855	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (436 aa)
	TOMM20	Translocase of outer mitochondrial membrane 20. (146 aa)
	atg5	Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
	mfn1	Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (755 aa)
	map1lc3b	Microtubule-associated protein 1 light chain 3 beta. (126 aa)
	mterf3	Mitochondrial transcription termination factor 3. (421 aa)
	ENSOMEP00000025299	Translocase of outer mitochondrial membrane 6 homolog (yeast). (64 aa)
	tomm70	Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (578 aa)
	ENSOMEP00000022578	Fzo_mitofusin domain-containing protein. (341 aa)
	ENSOMEP00000021599	Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (729 aa)
	ENSOMEP00000020966	Ribosomal protein S27a. (183 aa)
	TOMM40L	Translocase of outer mitochondrial membrane 40 like. (390 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOMEP00000001288	ENSOMEP00000007092	ENSOMEP00000001288	ENSOMEP00000007092	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Translocase of outer mitochondrial membrane 22 homolog (yeast).	0.458
ENSOMEP00000001288	ENSOMEP00000020966	ENSOMEP00000001288	ENSOMEP00000020966	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Ribosomal protein S27a.	0.708
ENSOMEP00000001288	ENSOMEP00000021599	ENSOMEP00000001288	ENSOMEP00000021599	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.874
ENSOMEP00000001288	ENSOMEP00000022578	ENSOMEP00000001288	ENSOMEP00000022578	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Fzo_mitofusin domain-containing protein.	0.896
ENSOMEP00000001288	ENSOMEP00000034855	ENSOMEP00000001288	ENSOMEP00000034855	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.984
ENSOMEP00000001288	ENSOMEP00000035400	ENSOMEP00000001288	ENSOMEP00000035400	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Ubiquitin-like domain-containing protein.	0.730
ENSOMEP00000001288	LOC112141467	ENSOMEP00000001288	ENSOMEP00000006663	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Sequestosome 1.	0.697
ENSOMEP00000001288	atg12	ENSOMEP00000001288	ENSOMEP00000010343	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	0.709
ENSOMEP00000001288	atg5	ENSOMEP00000001288	ENSOMEP00000032295	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.746
ENSOMEP00000001288	map1lc3b	ENSOMEP00000001288	ENSOMEP00000029536	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Microtubule-associated protein 1 light chain 3 beta.	0.699
ENSOMEP00000001288	mfn1	ENSOMEP00000001288	ENSOMEP00000030176	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.870
ENSOMEP00000001288	pink1	ENSOMEP00000001288	ENSOMEP00000016694	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	PTEN induced kinase 1.	0.893
ENSOMEP00000001288	vdac1	ENSOMEP00000001288	ENSOMEP00000002722	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Voltage-dependent anion channel 1.	0.812
ENSOMEP00000007092	ENSOMEP00000001288	ENSOMEP00000007092	ENSOMEP00000001288	Translocase of outer mitochondrial membrane 22 homolog (yeast).	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.458
ENSOMEP00000007092	ENSOMEP00000021599	ENSOMEP00000007092	ENSOMEP00000021599	Translocase of outer mitochondrial membrane 22 homolog (yeast).	Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.458
ENSOMEP00000007092	ENSOMEP00000022578	ENSOMEP00000007092	ENSOMEP00000022578	Translocase of outer mitochondrial membrane 22 homolog (yeast).	Fzo_mitofusin domain-containing protein.	0.458
ENSOMEP00000007092	ENSOMEP00000025299	ENSOMEP00000007092	ENSOMEP00000025299	Translocase of outer mitochondrial membrane 22 homolog (yeast).	Translocase of outer mitochondrial membrane 6 homolog (yeast).	0.985
ENSOMEP00000007092	LOC112157546	ENSOMEP00000007092	ENSOMEP00000006873	Translocase of outer mitochondrial membrane 22 homolog (yeast).	Translocase of outer mitochondrial membrane 20b.	0.980
ENSOMEP00000007092	TOMM20	ENSOMEP00000007092	ENSOMEP00000033592	Translocase of outer mitochondrial membrane 22 homolog (yeast).	Translocase of outer mitochondrial membrane 20.	0.980
ENSOMEP00000007092	TOMM40L	ENSOMEP00000007092	ENSOMEP00000017697	Translocase of outer mitochondrial membrane 22 homolog (yeast).	Translocase of outer mitochondrial membrane 40 like.	0.977