78 items (Oryzias melastigma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC112149657	CULLIN_2 domain-containing protein; Belongs to the cullin family. (803 aa)
	spred2	Sprouty related EVH1 domain containing 2. (467 aa)
	CUL3	Cullin 3; Belongs to the cullin family. (766 aa)
	ENSOMEP00000020966	Ribosomal protein S27a. (183 aa)
	psmc5	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
	psmd1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (961 aa)
	LOC112136524	Synaptic Ras GTPase activating protein 1b. (1375 aa)
	ENSOMEP00000019316	Proteasome 26S subunit, non-ATPase 3. (567 aa)
	LOC112140152	Proteasome subunit beta. (275 aa)
	LOC112140153	Proteasome subunit beta. (275 aa)
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	psmb7	Proteasome subunit beta. (307 aa)
	psma2	Proteasome subunit alpha type. (234 aa)
	LOC112136178	Proteasome subunit beta. (216 aa)
	ENSOMEP00000014956	RAS p21 protein activator 3. (809 aa)
	psmd14	Proteasome 26S subunit, non-ATPase 14. (310 aa)
	ENSOMEP00000012830	Proteasome subunit alpha type. (292 aa)
	psmc1	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (440 aa)
	RASAL1	RAS protein activator like 1. (821 aa)
	LOC112147624	Proteasome subunit beta. (271 aa)
	psmf1	Proteasome inhibitor subunit 1. (313 aa)
	psmc6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
	psmd13	Proteasome 26S subunit, non-ATPase 13. (378 aa)
	KRAS	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog. (189 aa)
	ENSOMEP00000008693	DUF3437 domain-containing protein. (181 aa)
	psmd6	Proteasome 26S subunit, non-ATPase 6. (389 aa)
	LOC112143453	Sprouty related EVH1 domain containing 2a. (427 aa)
	ENSOMEP00000007070	VWFA domain-containing protein. (229 aa)
	psmb6	Proteasome subunit beta. (232 aa)
	rasa1	RAS p21 protein activator (GTPase activating protein) 1a. (1053 aa)
	PSMD4	Proteasome 26S subunit, non-ATPase 4a. (372 aa)
	psmb1	Proteasome subunit beta. (237 aa)
	psma5	Proteasome subunit alpha type. (241 aa)
	LOC112144185	Proteasome subunit beta. (278 aa)
	psma8	Proteasome subunit alpha type. (251 aa)
	psmd11	Proteasome 26S subunit, non-ATPase 11b. (422 aa)
	RASA2	RAS p21 protein activator 2. (813 aa)
	psma1	Proteasome subunit alpha type. (267 aa)
	ENSOMEP00000001462	RAS protein activator like 2. (1314 aa)
	psmd9	Proteasome 26S subunit, non-ATPase 9. (212 aa)
	ENSOMEP00000000533	Proteasome activator subunit 4a. (1817 aa)
	psmd8	Proteasome 26S subunit, non-ATPase 8. (265 aa)
	ENSOMEP00000000360	Uncharacterized protein. (316 aa)
	psme2	Proteasome activator subunit 2. (243 aa)
	rbx1	Ring-box 1, E3 ubiquitin protein ligase. (108 aa)
	ENSOMEP00000024914	C2H2-type domain-containing protein. (513 aa)
	psmb2	Proteasome subunit beta. (199 aa)
	ENSOMEP00000025203	Proteasome 26S subunit, non-ATPase 4b. (367 aa)
	LOC112157068	RAS protein activator like 3. (1168 aa)
	psma4	Proteasome subunit alpha type. (261 aa)
	psmd12	Proteasome 26S subunit, non-ATPase 12. (456 aa)
	ENSOMEP00000026888	Proteasome 26S subunit, non-ATPase 5. (475 aa)
	ENSOMEP00000027277	Uncharacterized protein. (1053 aa)
	ENSOMEP00000027431	BLM10_mid domain-containing protein. (548 aa)
	kxd1	KxDL motif containing 1. (195 aa)
	ENSOMEP00000027783	Proteasome subunit beta; Belongs to the peptidase T1B family. (225 aa)
	ENSOMEP00000028219	Proteasome endopeptidase complex. (228 aa)
	dab2ip	DAB2 interacting protein b. (1230 aa)
	LOC112155391	Kelch repeat and BTB (POZ) domain containing 7. (622 aa)
	psmc2	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (433 aa)
	LOC112147746	Proteasome subunit beta. (298 aa)
	psmd10	Proteasome 26S subunit, non-ATPase 10. (226 aa)
	LOC112162363	Uncharacterized protein. (1268 aa)
	spred1	Sprouty related EVH1 domain containing 1. (443 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (869 aa)
	psme1	Proteasome activator subunit 1. (261 aa)
	LOC112146394	Zgc:55558. (186 aa)
	LOC112137408	Proteasome subunit beta 12. (217 aa)
	LOC112137393	Proteasome subunit beta. (275 aa)
	LOC112137399	Proteasome subunit beta. (272 aa)
	psmb3	Proteasome subunit beta. (206 aa)
	psma3	Proteasome subunit alpha type. (255 aa)
	LOC112140154	Proteasome subunit beta 12. (217 aa)
	ENSOMEP00000034008	Proteasome subunit beta 9a. (114 aa)
	ENSOMEP00000035400	Ubiquitin-like domain-containing protein. (137 aa)
	LOC112150731	Proteasome subunit beta11b. (359 aa)
	psmc4	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (417 aa)
	spred3	Sprouty related EVH1 domain containing 3. (538 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	CUL3	ENSOMEP00000031024	ENSOMEP00000021092	Cold shock domain containing E1, RNA-binding.	Cullin 3; Belongs to the cullin family.	0.402
CSDE1	ENSOMEP00000000360	ENSOMEP00000031024	ENSOMEP00000000360	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.805
CSDE1	ENSOMEP00000001462	ENSOMEP00000031024	ENSOMEP00000001462	Cold shock domain containing E1, RNA-binding.	RAS protein activator like 2.	0.633
CSDE1	ENSOMEP00000014956	ENSOMEP00000031024	ENSOMEP00000014956	Cold shock domain containing E1, RNA-binding.	RAS p21 protein activator 3.	0.727
CSDE1	ENSOMEP00000020966	ENSOMEP00000031024	ENSOMEP00000020966	Cold shock domain containing E1, RNA-binding.	Ribosomal protein S27a.	0.679
CSDE1	ENSOMEP00000024914	ENSOMEP00000031024	ENSOMEP00000024914	Cold shock domain containing E1, RNA-binding.	C2H2-type domain-containing protein.	0.926
CSDE1	ENSOMEP00000027277	ENSOMEP00000031024	ENSOMEP00000027277	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.633
CSDE1	ENSOMEP00000035400	ENSOMEP00000031024	ENSOMEP00000035400	Cold shock domain containing E1, RNA-binding.	Ubiquitin-like domain-containing protein.	0.686
CSDE1	LOC112136524	ENSOMEP00000031024	ENSOMEP00000019367	Cold shock domain containing E1, RNA-binding.	Synaptic Ras GTPase activating protein 1b.	0.633
CSDE1	LOC112143453	ENSOMEP00000031024	ENSOMEP00000007940	Cold shock domain containing E1, RNA-binding.	Sprouty related EVH1 domain containing 2a.	0.708
CSDE1	LOC112149657	ENSOMEP00000031024	ENSOMEP00000023103	Cold shock domain containing E1, RNA-binding.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.402
CSDE1	LOC112157068	ENSOMEP00000031024	ENSOMEP00000025218	Cold shock domain containing E1, RNA-binding.	RAS protein activator like 3.	0.633
CSDE1	LOC112162363	ENSOMEP00000031024	ENSOMEP00000030020	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.633
CSDE1	RASA2	ENSOMEP00000031024	ENSOMEP00000002693	Cold shock domain containing E1, RNA-binding.	RAS p21 protein activator 2.	0.727
CSDE1	RASAL1	ENSOMEP00000031024	ENSOMEP00000012214	Cold shock domain containing E1, RNA-binding.	RAS protein activator like 1.	0.743
CSDE1	dab2ip	ENSOMEP00000031024	ENSOMEP00000029433	Cold shock domain containing E1, RNA-binding.	DAB2 interacting protein b.	0.633
CSDE1	rasa1	ENSOMEP00000031024	ENSOMEP00000005335	Cold shock domain containing E1, RNA-binding.	RAS p21 protein activator (GTPase activating protein) 1a.	0.898
CSDE1	spred1	ENSOMEP00000031024	ENSOMEP00000030293	Cold shock domain containing E1, RNA-binding.	Sprouty related EVH1 domain containing 1.	0.708
CSDE1	spred2	ENSOMEP00000031024	ENSOMEP00000021365	Cold shock domain containing E1, RNA-binding.	Sprouty related EVH1 domain containing 2.	0.708
CSDE1	spred3	ENSOMEP00000031024	ENSOMEP00000021973	Cold shock domain containing E1, RNA-binding.	Sprouty related EVH1 domain containing 3.	0.621