36 items (Oryzias melastigma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC112163300	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (596 aa)
	LOC112161769	Pellino E3 ubiquitin protein ligase 1b. (426 aa)
	LOC112137707	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (568 aa)
	ENSOMEP00000035400	Ubiquitin-like domain-containing protein. (137 aa)
	ENSOMEP00000034855	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (436 aa)
	LOC112142434	Baculoviral IAP repeat containing 2. (638 aa)
	ENSOMEP00000027927	Ubiquitin-like domain-containing protein. (77 aa)
	kxd1	KxDL motif containing 1. (195 aa)
	pdcd6ip	Programmed cell death 6 interacting protein. (873 aa)
	LOC112151835	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (457 aa)
	LOC112163261	Uncharacterized protein; Belongs to the protein kinase superfamily. (485 aa)
	LOC112137228	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2. (733 aa)
	tradd	Tnfrsf1a-associated via death domain. (290 aa)
	ENSOMEP00000022297	Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family. (270 aa)
	LOC112151525	TNF superfamily member 10; Belongs to the tumor necrosis factor family. (409 aa)
	CDC37	Cell division cycle 37 homolog (S. cerevisiae). (375 aa)
	ENSOMEP00000020966	Ribosomal protein S27a. (183 aa)
	LOC112155945	Receptor-interacting serine-threonine kinase 3. (482 aa)
	LOC112157501	Pellino E3 ubiquitin protein ligase 1. (453 aa)
	LOC112163185	Protein kinase domain-containing protein. (460 aa)
	LOC112163186	Protein kinase domain-containing protein. (460 aa)
	stub1	STIP1 homology and U-Box containing protein 1. (284 aa)
	LOC112150384	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (284 aa)
	LOC112163478	Tumor necrosis factor receptor superfamily, member a. (447 aa)
	xiap	X-linked inhibitor of apoptosis. (433 aa)
	ENSOMEP00000012110	X-linked inhibitor of apoptosis. (318 aa)
	LOC112159238	RING-type domain-containing protein. (399 aa)
	LOC112147424	Uncharacterized protein; Belongs to the peptidase C14A family. (485 aa)
	ogt	O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1. (1038 aa)
	ENSOMEP00000006868	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (435 aa)
	ENSOMEP00000005338	Uncharacterized protein. (340 aa)
	ripk1	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like. (661 aa)
	ENSOMEP00000002833	Ubiquitin A-52 residue ribosomal protein fusion product 1. (129 aa)
	LOC112148678	Uncharacterized protein. (339 aa)
	fadd	Uncharacterized protein. (188 aa)
	cflar	Uncharacterized protein; Belongs to the peptidase C14A family. (464 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC37	ENSOMEP00000006868	ENSOMEP00000021780	ENSOMEP00000006868	Cell division cycle 37 homolog (S. cerevisiae).	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.606
CDC37	ENSOMEP00000027927	ENSOMEP00000021780	ENSOMEP00000027927	Cell division cycle 37 homolog (S. cerevisiae).	Ubiquitin-like domain-containing protein.	0.612
CDC37	ENSOMEP00000035400	ENSOMEP00000021780	ENSOMEP00000035400	Cell division cycle 37 homolog (S. cerevisiae).	Ubiquitin-like domain-containing protein.	0.656
CDC37	LOC112137228	ENSOMEP00000021780	ENSOMEP00000024356	Cell division cycle 37 homolog (S. cerevisiae).	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.	0.974
CDC37	LOC112151835	ENSOMEP00000021780	ENSOMEP00000026254	Cell division cycle 37 homolog (S. cerevisiae).	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.606
CDC37	LOC112155945	ENSOMEP00000021780	ENSOMEP00000017979	Cell division cycle 37 homolog (S. cerevisiae).	Receptor-interacting serine-threonine kinase 3.	0.606
CDC37	LOC112163185	ENSOMEP00000021780	ENSOMEP00000016017	Cell division cycle 37 homolog (S. cerevisiae).	Protein kinase domain-containing protein.	0.511
CDC37	LOC112163186	ENSOMEP00000021780	ENSOMEP00000015975	Cell division cycle 37 homolog (S. cerevisiae).	Protein kinase domain-containing protein.	0.511
CDC37	LOC112163261	ENSOMEP00000021780	ENSOMEP00000025985	Cell division cycle 37 homolog (S. cerevisiae).	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.606
CDC37	fadd	ENSOMEP00000021780	ENSOMEP00000002049	Cell division cycle 37 homolog (S. cerevisiae).	Uncharacterized protein.	0.503
CDC37	ripk1	ENSOMEP00000021780	ENSOMEP00000004240	Cell division cycle 37 homolog (S. cerevisiae).	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.	0.562
CDC37	stub1	ENSOMEP00000021780	ENSOMEP00000015175	Cell division cycle 37 homolog (S. cerevisiae).	STIP1 homology and U-Box containing protein 1.	0.701
ENSOMEP00000002833	ENSOMEP00000006868	ENSOMEP00000002833	ENSOMEP00000006868	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.646
ENSOMEP00000002833	ENSOMEP00000012110	ENSOMEP00000002833	ENSOMEP00000012110	Ubiquitin A-52 residue ribosomal protein fusion product 1.	X-linked inhibitor of apoptosis.	0.871
ENSOMEP00000002833	ENSOMEP00000020966	ENSOMEP00000002833	ENSOMEP00000020966	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ribosomal protein S27a.	0.999
ENSOMEP00000002833	ENSOMEP00000022297	ENSOMEP00000002833	ENSOMEP00000022297	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family.	0.465
ENSOMEP00000002833	ENSOMEP00000027927	ENSOMEP00000002833	ENSOMEP00000027927	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ubiquitin-like domain-containing protein.	0.989
ENSOMEP00000002833	ENSOMEP00000034855	ENSOMEP00000002833	ENSOMEP00000034855	Ubiquitin A-52 residue ribosomal protein fusion product 1.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.994
ENSOMEP00000002833	ENSOMEP00000035400	ENSOMEP00000002833	ENSOMEP00000035400	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ubiquitin-like domain-containing protein.	0.999
ENSOMEP00000002833	LOC112137228	ENSOMEP00000002833	ENSOMEP00000024356	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.	0.733