61 items (Oryzias melastigma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSOMEP00000009479	Uncharacterized protein; Belongs to the histone H2A family. (245 aa)
	LOC112156701	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
	pex5	Peroxisomal biogenesis factor 5. (642 aa)
	rad18	RAD18 E3 ubiquitin protein ligase. (487 aa)
	pex2	Peroxisomal biogenesis factor 2. (321 aa)
	ENSOMEP00000016821	Histone H2B; Belongs to the histone H2B family. (130 aa)
	slc39a13	Solute carrier family 39 member 13. (383 aa)
	LOC112147007	Zgc:123321. (239 aa)
	ube2n	Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
	ENSOMEP00000027958	LEO1 homolog, Paf1/RNA polymerase II complex component. (639 aa)
	ENSOMEP00000027927	Ubiquitin-like domain-containing protein. (77 aa)
	kxd1	KxDL motif containing 1. (195 aa)
	LOC112162099	Ubiquitin-conjugating enzyme E2D 1a; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	rnf144a	RBR-type E3 ubiquitin transferase. (295 aa)
	ENSOMEP00000026302	Si:dkey-261m9.6; Belongs to the histone H2B family. (111 aa)
	ENSOMEP00000024767	Uncharacterized protein. (216 aa)
	LOC112142776	Ras-related GTP binding A. (315 aa)
	ctr9	CTR9 homolog, Paf1/RNA polymerase II complex component. (1145 aa)
	pex13	SH3 domain-containing protein. (425 aa)
	ENSOMEP00000021856	Ring finger protein 152. (206 aa)
	ube2l3	Ubiquitin-conjugating enzyme E2L 3b; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
	ENSOMEP00000020966	Ribosomal protein S27a. (183 aa)
	rtf1	RTF1 homolog, Paf1/RNA polymerase II complex component. (673 aa)
	wac	WW domain containing adaptor with coiled-coil a. (545 aa)
	LOC112160339	Ubiquitin-conjugating enzyme E2D 3; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
	ube2a	Ubiquitin-conjugating enzyme E2A (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	ube2d2	Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	ENSOMEP00000015130	Histone H2B; Belongs to the histone H2B family. (114 aa)
	ENSOMEP00000032839	Histone H2B; Belongs to the histone H2B family. (115 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	ENSOMEP00000031710	Histone H2B; Belongs to the histone H2B family. (115 aa)
	hltf	Helicase-like transcription factor. (938 aa)
	rnf40	E3 ubiquitin protein ligase. (996 aa)
	pex5l	Peroxisomal biogenesis factor 5-like a. (619 aa)
	rnf181	Ring finger protein 181. (157 aa)
	pex10	Peroxisomal biogenesis factor 10. (320 aa)
	pex12	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (337 aa)
	yipf4	Protein YIPF. (237 aa)
	LOC112144284	Peroxisomal biogenesis factor 5-like b. (604 aa)
	pex14	Peroxisomal biogenesis factor 14. (393 aa)
	LOC112136564	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (194 aa)
	ube2b	Ubiquitin-conjugating enzyme E2B (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	ENSOMEP00000002833	Ubiquitin A-52 residue ribosomal protein fusion product 1. (129 aa)
	rnf20	E3 ubiquitin protein ligase. (1034 aa)
	paf1	PAF1 homolog, Paf1/RNA polymerase II complex component. (535 aa)
	ENSOMEP00000032897	Histone H2B; Belongs to the histone H2B family. (113 aa)
	wdr61	WD repeat domain 61. (305 aa)
	yipf5	Protein YIPF. (300 aa)
	ube2v2	Ubiquitin-conjugating enzyme E2 variant 2. (145 aa)
	ENSOMEP00000006622	Histone H2B; Belongs to the histone H2B family. (170 aa)
	ENSOMEP00000028169	Transmembrane protein 129, E3 ubiquitin protein ligase. (420 aa)
	LOC112147483	WW domain-containing protein. (531 aa)
	LOC112138059	Histone H2B 1/2. (124 aa)
	ENSOMEP00000007333	Uncharacterized protein. (164 aa)
	LOC112155100	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	ENSOMEP00000009159	Histone H2B; Belongs to the histone H2B family. (110 aa)
	ENSOMEP00000009290	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (557 aa)
	shprh	SNF2 histone linker PHD RING helicase. (1627 aa)
	ENSOMEP00000035400	Ubiquitin-like domain-containing protein. (137 aa)
	LOC112137899	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	LOC112137884	Ubiquitin-conjugating enzyme E2E 1; Belongs to the ubiquitin-conjugating enzyme family. (208 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOMEP00000002833	ENSOMEP00000006622	ENSOMEP00000002833	ENSOMEP00000006622	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Histone H2B; Belongs to the histone H2B family.	0.829
ENSOMEP00000002833	ENSOMEP00000009159	ENSOMEP00000002833	ENSOMEP00000009159	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Histone H2B; Belongs to the histone H2B family.	0.829
ENSOMEP00000002833	ENSOMEP00000009290	ENSOMEP00000002833	ENSOMEP00000009290	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	0.701
ENSOMEP00000002833	ENSOMEP00000009479	ENSOMEP00000002833	ENSOMEP00000009479	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Uncharacterized protein; Belongs to the histone H2A family.	0.829
ENSOMEP00000002833	ENSOMEP00000015130	ENSOMEP00000002833	ENSOMEP00000015130	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Histone H2B; Belongs to the histone H2B family.	0.807
ENSOMEP00000002833	ENSOMEP00000016821	ENSOMEP00000002833	ENSOMEP00000016821	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Histone H2B; Belongs to the histone H2B family.	0.829
ENSOMEP00000002833	ENSOMEP00000020966	ENSOMEP00000002833	ENSOMEP00000020966	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ribosomal protein S27a.	0.999
ENSOMEP00000002833	ENSOMEP00000021856	ENSOMEP00000002833	ENSOMEP00000021856	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ring finger protein 152.	0.694
ENSOMEP00000002833	ENSOMEP00000024767	ENSOMEP00000002833	ENSOMEP00000024767	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Uncharacterized protein.	0.645
ENSOMEP00000002833	ENSOMEP00000026302	ENSOMEP00000002833	ENSOMEP00000026302	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Si:dkey-261m9.6; Belongs to the histone H2B family.	0.821
ENSOMEP00000002833	ENSOMEP00000027927	ENSOMEP00000002833	ENSOMEP00000027927	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ubiquitin-like domain-containing protein.	0.989
ENSOMEP00000002833	ENSOMEP00000027958	ENSOMEP00000002833	ENSOMEP00000027958	Ubiquitin A-52 residue ribosomal protein fusion product 1.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.983
ENSOMEP00000002833	ENSOMEP00000031710	ENSOMEP00000002833	ENSOMEP00000031710	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Histone H2B; Belongs to the histone H2B family.	0.807
ENSOMEP00000002833	ENSOMEP00000032839	ENSOMEP00000002833	ENSOMEP00000032839	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Histone H2B; Belongs to the histone H2B family.	0.829
ENSOMEP00000002833	ENSOMEP00000032897	ENSOMEP00000002833	ENSOMEP00000032897	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Histone H2B; Belongs to the histone H2B family.	0.829
ENSOMEP00000002833	ENSOMEP00000035400	ENSOMEP00000002833	ENSOMEP00000035400	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ubiquitin-like domain-containing protein.	0.999
ENSOMEP00000002833	LOC112136564	ENSOMEP00000002833	ENSOMEP00000002265	Ubiquitin A-52 residue ribosomal protein fusion product 1.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.908
ENSOMEP00000002833	LOC112137884	ENSOMEP00000002833	ENSOMEP00000033837	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ubiquitin-conjugating enzyme E2E 1; Belongs to the ubiquitin-conjugating enzyme family.	0.908
ENSOMEP00000002833	LOC112137899	ENSOMEP00000002833	ENSOMEP00000035324	Ubiquitin A-52 residue ribosomal protein fusion product 1.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.945
ENSOMEP00000002833	LOC112138059	ENSOMEP00000002833	ENSOMEP00000006905	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Histone H2B 1/2.	0.829