68 items (Oryzias melastigma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSOMEP00000035844	Uncharacterized protein. (765 aa)
	ENSOMEP00000035400	Ubiquitin-like domain-containing protein. (137 aa)
	hivep1	Human immunodeficiency virus type I enhancer binding protein 1. (2534 aa)
	LOC112137842	Peroxisome proliferator-activated receptor gamma, coactivator 1 beta. (890 aa)
	ENSOMEP00000034008	Proteasome subunit beta 9a. (114 aa)
	LOC112140154	Proteasome subunit beta 12. (217 aa)
	psma3	Proteasome subunit alpha type. (255 aa)
	psmb3	Proteasome subunit beta. (206 aa)
	skp2	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase. (428 aa)
	LOC112150025	Proteasome subunit alpha type. (246 aa)
	dlx5	Distal-less homeobox 5a. (286 aa)
	LOC112137399	Proteasome subunit beta. (272 aa)
	LOC112137408	Proteasome subunit beta 12. (217 aa)
	psmc4	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (417 aa)
	rbx1	Ring-box 1, E3 ubiquitin protein ligase. (108 aa)
	cul1	Cullin 1b; Belongs to the cullin family. (777 aa)
	psmb2	Proteasome subunit beta. (199 aa)
	ENSOMEP00000025203	Proteasome 26S subunit, non-ATPase 4b. (367 aa)
	psma4	Proteasome subunit alpha type. (261 aa)
	psmd12	Proteasome 26S subunit, non-ATPase 12. (456 aa)
	ENSOMEP00000026888	Proteasome 26S subunit, non-ATPase 5. (475 aa)
	psmd7	Proteasome 26S subunit, non-ATPase 7. (324 aa)
	ENSOMEP00000027783	Proteasome subunit beta; Belongs to the peptidase T1B family. (225 aa)
	ENSOMEP00000028219	Proteasome endopeptidase complex. (228 aa)
	nkx3-2	NK3 homeobox 2. (263 aa)
	psmc2	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (433 aa)
	psmd10	Proteasome 26S subunit, non-ATPase 10. (226 aa)
	psme1	Proteasome activator subunit 1. (261 aa)
	psme2	Proteasome activator subunit 2. (243 aa)
	psmd8	Proteasome 26S subunit, non-ATPase 8. (265 aa)
	psmd9	Proteasome 26S subunit, non-ATPase 9. (212 aa)
	psma1	Proteasome subunit alpha type. (267 aa)
	hivep2	Human immunodeficiency virus type I enhancer binding protein 2a. (2305 aa)
	skp1	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
	psmd11	Proteasome 26S subunit, non-ATPase 11b. (422 aa)
	psme3	Proteasome activator subunit 3. (256 aa)
	LOC112144185	Proteasome subunit beta. (278 aa)
	psma5	Proteasome subunit alpha type. (241 aa)
	psmc3	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (427 aa)
	psmb1	Proteasome subunit beta. (237 aa)
	PSMD4	Proteasome 26S subunit, non-ATPase 4a. (372 aa)
	ENSOMEP00000005014	Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha. (929 aa)
	LOC112143051	Homeobox domain-containing protein. (277 aa)
	psmb6	Proteasome subunit beta. (232 aa)
	ENSOMEP00000007070	VWFA domain-containing protein. (229 aa)
	psmd6	Proteasome 26S subunit, non-ATPase 6. (389 aa)
	LOC112143399	Human immunodeficiency virus type I enhancer binding protein 3b. (2003 aa)
	psmd13	Proteasome 26S subunit, non-ATPase 13. (378 aa)
	psmc6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
	psmf1	Proteasome inhibitor subunit 1. (313 aa)
	LOC112147624	Proteasome subunit beta. (271 aa)
	psmc1	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (440 aa)
	ENSOMEP00000012830	Proteasome subunit alpha type. (292 aa)
	psmd14	Proteasome 26S subunit, non-ATPase 14. (310 aa)
	stub1	STIP1 homology and U-Box containing protein 1. (284 aa)
	LOC112136178	Proteasome subunit beta. (216 aa)
	psma2	Proteasome subunit alpha type. (234 aa)
	dlx6	Distal-less homeobox 6a. (246 aa)
	psmb7	Proteasome subunit beta. (307 aa)
	LOC112140153	Proteasome subunit beta. (275 aa)
	runx2	Runt-related transcription factor. (463 aa)
	LOC112160721	Human immunodeficiency virus type I enhancer binding protein 3a. (1691 aa)
	ENSOMEP00000019316	Proteasome 26S subunit, non-ATPase 3. (567 aa)
	psmd1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (961 aa)
	psmc5	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
	ENSOMEP00000020966	Ribosomal protein S27a. (183 aa)
	ENSOMEP00000021458	Uncharacterized protein. (189 aa)
	LOC112144768	Uncharacterized protein. (1641 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOMEP00000007070	ENSOMEP00000012830	ENSOMEP00000007070	ENSOMEP00000012830	VWFA domain-containing protein.	Proteasome subunit alpha type.	0.950
ENSOMEP00000007070	ENSOMEP00000019316	ENSOMEP00000007070	ENSOMEP00000019316	VWFA domain-containing protein.	Proteasome 26S subunit, non-ATPase 3.	0.992
ENSOMEP00000007070	ENSOMEP00000020966	ENSOMEP00000007070	ENSOMEP00000020966	VWFA domain-containing protein.	Ribosomal protein S27a.	0.963
ENSOMEP00000007070	ENSOMEP00000025203	ENSOMEP00000007070	ENSOMEP00000025203	VWFA domain-containing protein.	Proteasome 26S subunit, non-ATPase 4b.	0.755
ENSOMEP00000007070	ENSOMEP00000026888	ENSOMEP00000007070	ENSOMEP00000026888	VWFA domain-containing protein.	Proteasome 26S subunit, non-ATPase 5.	0.971
ENSOMEP00000007070	ENSOMEP00000027783	ENSOMEP00000007070	ENSOMEP00000027783	VWFA domain-containing protein.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.993
ENSOMEP00000007070	ENSOMEP00000028219	ENSOMEP00000007070	ENSOMEP00000028219	VWFA domain-containing protein.	Proteasome endopeptidase complex.	0.950
ENSOMEP00000007070	ENSOMEP00000034008	ENSOMEP00000007070	ENSOMEP00000034008	VWFA domain-containing protein.	Proteasome subunit beta 9a.	0.943
ENSOMEP00000007070	ENSOMEP00000035400	ENSOMEP00000007070	ENSOMEP00000035400	VWFA domain-containing protein.	Ubiquitin-like domain-containing protein.	0.955
ENSOMEP00000007070	LOC112136178	ENSOMEP00000007070	ENSOMEP00000015483	VWFA domain-containing protein.	Proteasome subunit beta.	0.943
ENSOMEP00000007070	LOC112137399	ENSOMEP00000007070	ENSOMEP00000031974	VWFA domain-containing protein.	Proteasome subunit beta.	0.933
ENSOMEP00000007070	LOC112137408	ENSOMEP00000007070	ENSOMEP00000031958	VWFA domain-containing protein.	Proteasome subunit beta 12.	0.943
ENSOMEP00000007070	LOC112140153	ENSOMEP00000007070	ENSOMEP00000018565	VWFA domain-containing protein.	Proteasome subunit beta.	0.933
ENSOMEP00000007070	LOC112140154	ENSOMEP00000007070	ENSOMEP00000034000	VWFA domain-containing protein.	Proteasome subunit beta 12.	0.943
ENSOMEP00000007070	LOC112144185	ENSOMEP00000007070	ENSOMEP00000003923	VWFA domain-containing protein.	Proteasome subunit beta.	0.956
ENSOMEP00000007070	LOC112147624	ENSOMEP00000007070	ENSOMEP00000012092	VWFA domain-containing protein.	Proteasome subunit beta.	0.933
ENSOMEP00000007070	LOC112150025	ENSOMEP00000007070	ENSOMEP00000032758	VWFA domain-containing protein.	Proteasome subunit alpha type.	0.950
ENSOMEP00000007070	cul1	ENSOMEP00000007070	ENSOMEP00000025166	VWFA domain-containing protein.	Cullin 1b; Belongs to the cullin family.	0.736
ENSOMEP00000007070	psma1	ENSOMEP00000007070	ENSOMEP00000002147	VWFA domain-containing protein.	Proteasome subunit alpha type.	0.994
ENSOMEP00000007070	psma2	ENSOMEP00000007070	ENSOMEP00000015752	VWFA domain-containing protein.	Proteasome subunit alpha type.	0.992