STRINGSTRING
LOC112151024 LOC112151024 vta1 vta1 ENSOMEP00000001140 ENSOMEP00000001140 LOC112151790 LOC112151790 ubap1 ubap1 vps37b vps37b chmp2a chmp2a LOC112151226 LOC112151226 ENSOMEP00000002833 ENSOMEP00000002833 VPS4B VPS4B ENSOMEP00000002955 ENSOMEP00000002955 vps25 vps25 LOC112137566 LOC112137566 LOC112146985 LOC112146985 LOC112147540 LOC112147540 stam stam vps28 vps28 ENSOMEP00000013049 ENSOMEP00000013049 LOC112147885 LOC112147885 chmp6 chmp6 vps36 vps36 LOC112152295 LOC112152295 stam2 stam2 zfyve19 zfyve19 LOC112149299 LOC112149299 ZFYVE1 ZFYVE1 ENSOMEP00000020966 ENSOMEP00000020966 ENSOMEP00000021830 ENSOMEP00000021830 snf8 snf8 ENSOMEP00000023638 ENSOMEP00000023638 chmp4b chmp4b chmp3 chmp3 hgs hgs vps37a vps37a kxd1 kxd1 ENSOMEP00000027927 ENSOMEP00000027927 LOC112136919 LOC112136919 LOC112137583 LOC112137583 tm9sf1 tm9sf1 LOC112163121 LOC112163121 ENSOMEP00000035909 ENSOMEP00000035909 ENSOMEP00000035400 ENSOMEP00000035400 LOC112152805 LOC112152805
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC112151024Charged multivesicular body protein 5b. (220 aa)
vta1Vesicle (multivesicular body) trafficking 1. (321 aa)
ENSOMEP00000001140Si:ch211-284f22.3. (303 aa)
LOC112151790Tumor susceptibility 101a. (384 aa)
ubap1Ubiquitin associated protein 1. (463 aa)
vps37bZgc:114173. (280 aa)
chmp2aCharged multivesicular body protein 2A. (220 aa)
LOC112151226Charged multivesicular body protein 4C. (230 aa)
ENSOMEP00000002833Ubiquitin A-52 residue ribosomal protein fusion product 1. (129 aa)
VPS4BVacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (415 aa)
ENSOMEP00000002955MIT domain-containing protein. (86 aa)
vps25Vacuolar protein sorting 25 homolog. (246 aa)
LOC112137566Uncharacterized protein. (323 aa)
LOC112146985Charged multivesicular body protein 6a. (207 aa)
LOC112147540Charged multivesicular body protein 5a. (220 aa)
stamSignal transducing adaptor molecule (SH3 domain and ITAM motif) 1. (515 aa)
vps28Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (256 aa)
ENSOMEP00000013049Zgc:153240. (364 aa)
LOC112147885Multivesicular body subunit 12Bb. (247 aa)
chmp6Charged multivesicular body protein 6. (202 aa)
vps36Vacuolar protein sorting 36 homolog. (382 aa)
LOC112152295Uncharacterized protein. (379 aa)
stam2Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2. (505 aa)
zfyve19Zinc finger, FYVE domain containing 19. (427 aa)
LOC112149299Si:ch211-11n16.2. (652 aa)
ZFYVE1Uncharacterized protein. (786 aa)
ENSOMEP00000020966Ribosomal protein S27a. (183 aa)
ENSOMEP00000021830Uncharacterized protein. (312 aa)
snf8Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (257 aa)
ENSOMEP00000023638Zinc finger, FYVE domain containing 1. (687 aa)
chmp4bCharged multivesicular body protein 4Bb. (222 aa)
chmp3Charged multivesicular body protein 3. (220 aa)
hgsHepatocyte growth factor-regulated tyrosine kinase substrate. (768 aa)
vps37aVPS37A subunit of ESCRT-I. (395 aa)
kxd1KxDL motif containing 1. (195 aa)
ENSOMEP00000027927Ubiquitin-like domain-containing protein. (77 aa)
LOC112136919Uncharacterized protein; Belongs to the AAA ATPase family. (455 aa)
LOC112137583VPS37C subunit of ESCRT-I. (363 aa)
tm9sf1Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (594 aa)
LOC112163121Multivesicular body subunit 12Ba. (294 aa)
ENSOMEP00000035909Charged multivesicular body protein 2Bb. (221 aa)
ENSOMEP00000035400Ubiquitin-like domain-containing protein. (137 aa)
LOC112152805Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (436 aa)
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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