STRINGSTRING
LOC112145555 LOC112145555 LOC112144284 LOC112144284 usp30 usp30 pex5l pex5l ENSOMEP00000027927 ENSOMEP00000027927 kxd1 kxd1 ENSOMEP00000023000 ENSOMEP00000023000 ENSOMEP00000020966 ENSOMEP00000020966 pex5 pex5 ENSOMEP00000002833 ENSOMEP00000002833 nbr1 nbr1 ENSOMEP00000004138 ENSOMEP00000004138 ENSOMEP00000035400 ENSOMEP00000035400 ENSOMEP00000004154 ENSOMEP00000004154 ILRUN ILRUN ENSOMEP00000006614 ENSOMEP00000006614 LOC112141467 LOC112141467
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC112145555Inflammation and lipid regulator with UBA-like and NBR1-like domains. (288 aa)
LOC112144284Peroxisomal biogenesis factor 5-like b. (604 aa)
usp30Ubiquitin carboxyl-terminal hydrolase. (505 aa)
pex5lPeroxisomal biogenesis factor 5-like a. (619 aa)
ENSOMEP00000027927Ubiquitin-like domain-containing protein. (77 aa)
kxd1KxDL motif containing 1. (195 aa)
ENSOMEP00000023000NBR1 autophagy cargo receptor b. (879 aa)
ENSOMEP00000020966Ribosomal protein S27a. (183 aa)
pex5Peroxisomal biogenesis factor 5. (642 aa)
ENSOMEP00000002833Ubiquitin A-52 residue ribosomal protein fusion product 1. (129 aa)
nbr1NBR1 autophagy cargo receptor a. (1036 aa)
ENSOMEP00000004138TAN domain-containing protein. (176 aa)
ENSOMEP00000035400Ubiquitin-like domain-containing protein. (137 aa)
ENSOMEP00000004154Uncharacterized protein. (133 aa)
ILRUNInflammation and lipid regulator with UBA-like and NBR1-like domains. (290 aa)
ENSOMEP00000006614Uncharacterized protein. (98 aa)
LOC112141467Sequestosome 1. (442 aa)
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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