17 items (Oryzias melastigma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC112145555	Inflammation and lipid regulator with UBA-like and NBR1-like domains. (288 aa)
	LOC112144284	Peroxisomal biogenesis factor 5-like b. (604 aa)
	usp30	Ubiquitin carboxyl-terminal hydrolase. (505 aa)
	pex5l	Peroxisomal biogenesis factor 5-like a. (619 aa)
	ENSOMEP00000027927	Ubiquitin-like domain-containing protein. (77 aa)
	kxd1	KxDL motif containing 1. (195 aa)
	ENSOMEP00000023000	NBR1 autophagy cargo receptor b. (879 aa)
	ENSOMEP00000020966	Ribosomal protein S27a. (183 aa)
	pex5	Peroxisomal biogenesis factor 5. (642 aa)
	ENSOMEP00000002833	Ubiquitin A-52 residue ribosomal protein fusion product 1. (129 aa)
	nbr1	NBR1 autophagy cargo receptor a. (1036 aa)
	ENSOMEP00000004138	TAN domain-containing protein. (176 aa)
	ENSOMEP00000035400	Ubiquitin-like domain-containing protein. (137 aa)
	ENSOMEP00000004154	Uncharacterized protein. (133 aa)
	ILRUN	Inflammation and lipid regulator with UBA-like and NBR1-like domains. (290 aa)
	ENSOMEP00000006614	Uncharacterized protein. (98 aa)
	LOC112141467	Sequestosome 1. (442 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOMEP00000002833	ENSOMEP00000006614	ENSOMEP00000002833	ENSOMEP00000006614	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Uncharacterized protein.	0.835
ENSOMEP00000002833	ENSOMEP00000020966	ENSOMEP00000002833	ENSOMEP00000020966	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ribosomal protein S27a.	0.999
ENSOMEP00000002833	ENSOMEP00000023000	ENSOMEP00000002833	ENSOMEP00000023000	Ubiquitin A-52 residue ribosomal protein fusion product 1.	NBR1 autophagy cargo receptor b.	0.992
ENSOMEP00000002833	ENSOMEP00000027927	ENSOMEP00000002833	ENSOMEP00000027927	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ubiquitin-like domain-containing protein.	0.989
ENSOMEP00000002833	ENSOMEP00000035400	ENSOMEP00000002833	ENSOMEP00000035400	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ubiquitin-like domain-containing protein.	0.999
ENSOMEP00000002833	ILRUN	ENSOMEP00000002833	ENSOMEP00000004156	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	0.683
ENSOMEP00000002833	LOC112141467	ENSOMEP00000002833	ENSOMEP00000006663	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Sequestosome 1.	0.866
ENSOMEP00000002833	LOC112144284	ENSOMEP00000002833	ENSOMEP00000001294	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Peroxisomal biogenesis factor 5-like b.	0.652
ENSOMEP00000002833	LOC112145555	ENSOMEP00000002833	ENSOMEP00000010762	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	0.683
ENSOMEP00000002833	kxd1	ENSOMEP00000002833	ENSOMEP00000027436	Ubiquitin A-52 residue ribosomal protein fusion product 1.	KxDL motif containing 1.	0.779
ENSOMEP00000002833	nbr1	ENSOMEP00000002833	ENSOMEP00000003429	Ubiquitin A-52 residue ribosomal protein fusion product 1.	NBR1 autophagy cargo receptor a.	0.992
ENSOMEP00000002833	pex5	ENSOMEP00000002833	ENSOMEP00000012517	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Peroxisomal biogenesis factor 5.	0.652
ENSOMEP00000002833	pex5l	ENSOMEP00000002833	ENSOMEP00000029989	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Peroxisomal biogenesis factor 5-like a.	0.652
ENSOMEP00000002833	usp30	ENSOMEP00000002833	ENSOMEP00000001373	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ubiquitin carboxyl-terminal hydrolase.	0.980
ENSOMEP00000004138	ENSOMEP00000004154	ENSOMEP00000004138	ENSOMEP00000004154	TAN domain-containing protein.	Uncharacterized protein.	0.921
ENSOMEP00000004138	ENSOMEP00000020966	ENSOMEP00000004138	ENSOMEP00000020966	TAN domain-containing protein.	Ribosomal protein S27a.	0.651
ENSOMEP00000004138	ENSOMEP00000023000	ENSOMEP00000004138	ENSOMEP00000023000	TAN domain-containing protein.	NBR1 autophagy cargo receptor b.	0.982
ENSOMEP00000004138	ENSOMEP00000027927	ENSOMEP00000004138	ENSOMEP00000027927	TAN domain-containing protein.	Ubiquitin-like domain-containing protein.	0.640
ENSOMEP00000004138	ENSOMEP00000035400	ENSOMEP00000004138	ENSOMEP00000035400	TAN domain-containing protein.	Ubiquitin-like domain-containing protein.	0.685
ENSOMEP00000004138	LOC112141467	ENSOMEP00000004138	ENSOMEP00000006663	TAN domain-containing protein.	Sequestosome 1.	0.784