12 items (Oryzias melastigma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cul1	Cullin 1b; Belongs to the cullin family. (777 aa)
	ENSOMEP00000022440	BTB and CNC homology 1, basic leucine zipper transcription factor 1 a. (613 aa)
	mafk	V-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K. (158 aa)
	ENSOMEP00000035400	Ubiquitin-like domain-containing protein. (137 aa)
	bach2	BTB and CNC homology 1, basic leucine zipper transcription factor 2b. (820 aa)
	skp1	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
	LOC112143040	BTB and CNC homology 1, basic leucine zipper transcription factor 1 b. (707 aa)
	LOC112146602	Uncharacterized protein. (697 aa)
	fbxl17	F-box and leucine-rich repeat protein 17. (651 aa)
	ENSOMEP00000020966	Ribosomal protein S27a. (183 aa)
	skp2	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase. (428 aa)
	rbx1	Ring-box 1, E3 ubiquitin protein ligase. (108 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOMEP00000020966	ENSOMEP00000022440	ENSOMEP00000020966	ENSOMEP00000022440	Ribosomal protein S27a.	BTB and CNC homology 1, basic leucine zipper transcription factor 1 a.	0.667
ENSOMEP00000020966	ENSOMEP00000035400	ENSOMEP00000020966	ENSOMEP00000035400	Ribosomal protein S27a.	Ubiquitin-like domain-containing protein.	0.998
ENSOMEP00000020966	LOC112143040	ENSOMEP00000020966	ENSOMEP00000013420	Ribosomal protein S27a.	BTB and CNC homology 1, basic leucine zipper transcription factor 1 b.	0.667
ENSOMEP00000020966	LOC112146602	ENSOMEP00000020966	ENSOMEP00000016680	Ribosomal protein S27a.	Uncharacterized protein.	0.667
ENSOMEP00000020966	bach2	ENSOMEP00000020966	ENSOMEP00000001477	Ribosomal protein S27a.	BTB and CNC homology 1, basic leucine zipper transcription factor 2b.	0.667
ENSOMEP00000020966	cul1	ENSOMEP00000020966	ENSOMEP00000025166	Ribosomal protein S27a.	Cullin 1b; Belongs to the cullin family.	0.964
ENSOMEP00000020966	fbxl17	ENSOMEP00000020966	ENSOMEP00000019251	Ribosomal protein S27a.	F-box and leucine-rich repeat protein 17.	0.763
ENSOMEP00000020966	rbx1	ENSOMEP00000020966	ENSOMEP00000024715	Ribosomal protein S27a.	Ring-box 1, E3 ubiquitin protein ligase.	0.969
ENSOMEP00000020966	skp1	ENSOMEP00000020966	ENSOMEP00000002616	Ribosomal protein S27a.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.930
ENSOMEP00000020966	skp2	ENSOMEP00000020966	ENSOMEP00000032762	Ribosomal protein S27a.	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.	0.929
ENSOMEP00000022440	ENSOMEP00000020966	ENSOMEP00000022440	ENSOMEP00000020966	BTB and CNC homology 1, basic leucine zipper transcription factor 1 a.	Ribosomal protein S27a.	0.667
ENSOMEP00000022440	ENSOMEP00000035400	ENSOMEP00000022440	ENSOMEP00000035400	BTB and CNC homology 1, basic leucine zipper transcription factor 1 a.	Ubiquitin-like domain-containing protein.	0.636
ENSOMEP00000022440	cul1	ENSOMEP00000022440	ENSOMEP00000025166	BTB and CNC homology 1, basic leucine zipper transcription factor 1 a.	Cullin 1b; Belongs to the cullin family.	0.688
ENSOMEP00000022440	fbxl17	ENSOMEP00000022440	ENSOMEP00000019251	BTB and CNC homology 1, basic leucine zipper transcription factor 1 a.	F-box and leucine-rich repeat protein 17.	0.807
ENSOMEP00000022440	mafk	ENSOMEP00000022440	ENSOMEP00000000011	BTB and CNC homology 1, basic leucine zipper transcription factor 1 a.	V-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K.	0.901
ENSOMEP00000022440	rbx1	ENSOMEP00000022440	ENSOMEP00000024715	BTB and CNC homology 1, basic leucine zipper transcription factor 1 a.	Ring-box 1, E3 ubiquitin protein ligase.	0.641
ENSOMEP00000022440	skp1	ENSOMEP00000022440	ENSOMEP00000002616	BTB and CNC homology 1, basic leucine zipper transcription factor 1 a.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.652
ENSOMEP00000035400	ENSOMEP00000020966	ENSOMEP00000035400	ENSOMEP00000020966	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.998
ENSOMEP00000035400	ENSOMEP00000022440	ENSOMEP00000035400	ENSOMEP00000022440	Ubiquitin-like domain-containing protein.	BTB and CNC homology 1, basic leucine zipper transcription factor 1 a.	0.636
ENSOMEP00000035400	LOC112143040	ENSOMEP00000035400	ENSOMEP00000013420	Ubiquitin-like domain-containing protein.	BTB and CNC homology 1, basic leucine zipper transcription factor 1 b.	0.636