14 items (Oryzias melastigma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC112157790	Uncharacterized protein. (426 aa)
	LOC112162018	Component of inhibitor of nuclear factor kappa B kinase complex. (731 aa)
	ENSOMEP00000001754	UBIQUITIN_CONJUGAT_2 domain-containing protein. (147 aa)
	LOC112154264	Protein kinase domain-containing protein. (765 aa)
	LOC112156701	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
	ENSOMEP00000009965	Protein kinase domain-containing protein. (546 aa)
	LOC112157501	Pellino E3 ubiquitin protein ligase 1. (453 aa)
	ENSOMEP00000020966	Ribosomal protein S27a. (183 aa)
	traf6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (569 aa)
	ube2n	Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
	ikbkb	Inhibitor of nuclear factor kappa B kinase subunit beta. (761 aa)
	ENSOMEP00000035303	Pellino E3 ubiquitin protein ligase family member 2. (419 aa)
	ENSOMEP00000035400	Ubiquitin-like domain-containing protein. (137 aa)
	LOC112161769	Pellino E3 ubiquitin protein ligase 1b. (426 aa)

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOMEP00000001754	ENSOMEP00000009965	ENSOMEP00000001754	ENSOMEP00000009965	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Protein kinase domain-containing protein.	0.687
ENSOMEP00000001754	ENSOMEP00000020966	ENSOMEP00000001754	ENSOMEP00000020966	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ribosomal protein S27a.	0.999
ENSOMEP00000001754	ENSOMEP00000035303	ENSOMEP00000001754	ENSOMEP00000035303	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Pellino E3 ubiquitin protein ligase family member 2.	0.896
ENSOMEP00000001754	ENSOMEP00000035400	ENSOMEP00000001754	ENSOMEP00000035400	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.972
ENSOMEP00000001754	LOC112154264	ENSOMEP00000001754	ENSOMEP00000002135	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Protein kinase domain-containing protein.	0.714
ENSOMEP00000001754	LOC112156701	ENSOMEP00000001754	ENSOMEP00000009481	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.999
ENSOMEP00000001754	LOC112157501	ENSOMEP00000001754	ENSOMEP00000017317	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Pellino E3 ubiquitin protein ligase 1.	0.896
ENSOMEP00000001754	LOC112157790	ENSOMEP00000001754	ENSOMEP00000028245	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.896
ENSOMEP00000001754	LOC112161769	ENSOMEP00000001754	ENSOMEP00000035723	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Pellino E3 ubiquitin protein ligase 1b.	0.896
ENSOMEP00000001754	LOC112162018	ENSOMEP00000001754	ENSOMEP00000001314	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Component of inhibitor of nuclear factor kappa B kinase complex.	0.714
ENSOMEP00000001754	ikbkb	ENSOMEP00000001754	ENSOMEP00000032160	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.714
ENSOMEP00000001754	traf6	ENSOMEP00000001754	ENSOMEP00000024082	UBIQUITIN_CONJUGAT_2 domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.813
ENSOMEP00000001754	ube2n	ENSOMEP00000001754	ENSOMEP00000028032	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.	0.999
ENSOMEP00000009965	ENSOMEP00000001754	ENSOMEP00000009965	ENSOMEP00000001754	Protein kinase domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.687
ENSOMEP00000009965	ENSOMEP00000020966	ENSOMEP00000009965	ENSOMEP00000020966	Protein kinase domain-containing protein.	Ribosomal protein S27a.	0.724
ENSOMEP00000009965	ENSOMEP00000035303	ENSOMEP00000009965	ENSOMEP00000035303	Protein kinase domain-containing protein.	Pellino E3 ubiquitin protein ligase family member 2.	0.911
ENSOMEP00000009965	ENSOMEP00000035400	ENSOMEP00000009965	ENSOMEP00000035400	Protein kinase domain-containing protein.	Ubiquitin-like domain-containing protein.	0.713
ENSOMEP00000009965	LOC112154264	ENSOMEP00000009965	ENSOMEP00000002135	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.867
ENSOMEP00000009965	LOC112156701	ENSOMEP00000009965	ENSOMEP00000009481	Protein kinase domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.784
ENSOMEP00000009965	LOC112157501	ENSOMEP00000009965	ENSOMEP00000017317	Protein kinase domain-containing protein.	Pellino E3 ubiquitin protein ligase 1.	0.911