STRINGSTRING
smad2 smad2 smad6 smad6 SMAD3-2 SMAD3-2 NFIX NFIX smad7 smad7 SMAD3 SMAD3 nfic nfic nfia nfia NFIB NFIB smad1 smad1 LOC112148478 LOC112148478 LOC112153580 LOC112153580 smad9 smad9 nfix nfix LOC112160358 LOC112160358 LOC112136593 LOC112136593 ENSOMEP00000023058 ENSOMEP00000023058 LOC112148176 LOC112148176
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
smad2Mothers against decapentaplegic homolog. (473 aa)
smad6Mothers against decapentaplegic homolog. (485 aa)
SMAD3-2Mothers against decapentaplegic homolog. (429 aa)
NFIXNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (555 aa)
smad7Mothers against decapentaplegic homolog. (375 aa)
SMAD3Mothers against decapentaplegic homolog. (425 aa)
nficNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (501 aa)
nfiaNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (535 aa)
NFIBNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (560 aa)
smad1Mothers against decapentaplegic homolog. (471 aa)
LOC112148478Mothers against decapentaplegic homolog. (467 aa)
LOC112153580Mothers against decapentaplegic homolog. (464 aa)
smad9Mothers against decapentaplegic homolog. (530 aa)
nfixNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (569 aa)
LOC112160358Mothers against decapentaplegic homolog. (495 aa)
LOC112136593Mothers against decapentaplegic homolog. (536 aa)
ENSOMEP00000023058Mothers against decapentaplegic homolog. (493 aa)
LOC112148176Mothers against decapentaplegic homolog. (510 aa)
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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