STRINGSTRING
F751_0246 F751_0246 F751_0840 F751_0840 F751_2174 F751_2174 F751_0775 F751_0775 F751_4583 F751_4583 F751_4626 F751_4626 F751_1949 F751_1949 F751_2326 F751_2326 F751_1360 F751_1360 F751_2382 F751_2382 F751_0365 F751_0365 F751_1188 F751_1188 F751_1225 F751_1225 F751_5274 F751_5274 F751_5277 F751_5277 F751_5225 F751_5225 F751_0175 F751_0175 F751_3485 F751_3485 F751_0886 F751_0886 F751_0550 F751_0550 F751_2453 F751_2453 F751_4693 F751_4693
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F751_0246Exosome complex component RRP43. (276 aa)
F751_0840Putative CCR4-associated factor 1-like protein 7. (293 aa)
F751_2174Exosome component 10. (1135 aa)
F751_07755'-3' exoribonuclease 1. (663 aa)
F751_4583Exosome complex component rrp4. (286 aa)
F751_4626Glucose-repressible alcohol dehydrogenase transcriptional effector. (345 aa)
F751_1949Exosome complex exonuclease RRP44; Belongs to the RNR ribonuclease family. (954 aa)
F751_2326Exosome complex component RRP45. (509 aa)
F751_13605'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (912 aa)
F751_2382Polyribonucleotide nucleotidyltransferase. (661 aa)
F751_0365Exosome complex component RRP42. (578 aa)
F751_1188U6 snRNA phosphodiesterase. (425 aa)
F751_1225DIS3-like exonuclease 2. (678 aa)
F751_52742',5'-phosphodiesterase 12. (283 aa)
F751_5277Poly(A)-specific ribonuclease PARN. (454 aa)
F751_5225Polyribonucleotide nucleotidyltransferase. (532 aa)
F751_0175Putative exosome complex component rrp40. (195 aa)
F751_3485Carbon catabolite repressor protein 4-like protein 6. (579 aa)
F751_0886Putative ribonuclease. (628 aa)
F751_0550PAB-dependent poly(A)-specific ribonuclease subunit 2. (1380 aa)
F751_2453Carbon catabolite repressor protein 4-like protein 2. (558 aa)
F751_46935'-3' exoribonuclease 1. (1216 aa)
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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