STRINGSTRING
F751_1253 F751_1253 F751_1389 F751_1389 F751_2377 F751_2377 F751_2426 F751_2426 F751_1773 F751_1773 F751_1971 F751_1971 F751_1984 F751_1984 F751_2519 F751_2519 F751_2585 F751_2585 F751_6294 F751_6294 F751_4708 F751_4708 F751_4750 F751_4750 F751_4775 F751_4775 F751_2193 F751_2193 F751_2207 F751_2207 F751_6632 F751_6632 F751_0721 F751_0721 F751_4442 F751_4442 F751_1174 F751_1174 F751_6076 F751_6076 F751_4131 F751_4131 F751_2800 F751_2800 F751_5393 F751_5393 F751_6990 F751_6990 F751_5285 F751_5285 F751_5309 F751_5309 F751_3708 F751_3708 F751_0117 F751_0117 F751_0092 F751_0092 F751_0116 F751_0116 F751_4246 F751_4246 F751_6740 F751_6740 F751_1022 F751_1022 F751_4378 F751_4378 F751_4382 F751_4382 F751_6794 F751_6794
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F751_1253DNA repair helicase XPB2. (785 aa)
F751_1389DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1554 aa)
F751_2377DNA-directed RNA polymerase II subunit RPB7. (173 aa)
F751_2426Transcription initiation factor TFIID subunit 1. (1918 aa)
F751_1773DNA-directed RNA polymerases II, IV and V subunit 3. (313 aa)
F751_1971DNA-directed RNA polymerases I, II, and III subunit RPABC1. (188 aa)
F751_1984RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (397 aa)
F751_2519WD repeat-containing protein 61. (286 aa)
F751_2585TAF4 domain-containing protein. (355 aa)
F751_6294Putative RNA polymerase II transcription factor B subunit 1-1. (480 aa)
F751_4708Transcription initiation factor IIA subunit 2. (122 aa)
F751_4750TAFII55_N domain-containing protein. (178 aa)
F751_4775Transcription initiation factor TFIID subunit 10. (128 aa)
F751_2193RNA polymerase-associated protein LEO1. (423 aa)
F751_2207Parafibromin. (415 aa)
F751_6632RNA polymerase-associated protein CTR9-like protein. (777 aa)
F751_0721Transcription initiation factor TFIID subunit 5. (483 aa)
F751_4442Cyclin-dependent kinase D-1. (346 aa)
F751_1174Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (365 aa)
F751_6076RNA polymerase II-associated factor 1-like protein. (387 aa)
F751_4131DNA-directed RNA polymerase II 16 kDa polypeptide. (147 aa)
F751_2800Uncharacterized protein. (350 aa)
F751_5393General transcription factor IIF subunit 2. (261 aa)
F751_6990DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (116 aa)
F751_5285DNA-directed RNA polymerases II, IV and V subunit 11. (167 aa)
F751_5309Uncharacterized protein. (99 aa)
F751_3708DNA-directed RNA polymerase subunit 10-like protein. (74 aa)
F751_0117Uncharacterized protein. (134 aa)
F751_0092Transcription initiation factor TFIID subunit 8. (366 aa)
F751_0116DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (702 aa)
F751_4246RNA polymerase-associated protein RTF1-like protein. (535 aa)
F751_6740General transcription factor IIH subunit 2. (692 aa)
F751_1022Transcription initiation factor IIA subunit 1. (245 aa)
F751_4378DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1137 aa)
F751_4382Cyclin-H1-1; Belongs to the cyclin family. (254 aa)
F751_6794CDK-activating kinase assembly factor MAT1. (202 aa)
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.