(15 nodes) SWI/SNF complex, and RSC-type complex network (Aspergillus rambellii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARAM_005331	Chromatin remodeling complex subunit (Rsc9). (738 aa)
	ARAM_003516	Uncharacterized protein. (799 aa)
	ARAM_000716	MARVEL domain-containing protein. (155 aa)
	ARAM_007191	Uncharacterized protein. (694 aa)
	ARAM_002540	Uncharacterized protein. (680 aa)
	ARAM_001146	Uncharacterized protein. (206 aa)
	ARAM_002812	Chromatin structure-remodeling complex subunit snf2. (1316 aa)
	ARAM_006119	Uncharacterized protein. (571 aa)
	ARAM_004476	RSC complex subunit Sfh1. (569 aa)
	ARAM_003053	ARID domain-containing protein. (978 aa)
	ARAM_003959	Nuclear localization protein. (602 aa)
	ARAM_002518	SWI-SNF complex subunit (BAF60b). (509 aa)
	ARAM_005018	Putative chromatin remodeling complex subunit (Arp9); Belongs to the actin family. (673 aa)
	ARAM_000653	Putative RSC complex subunit (RSC1). (951 aa)
	ARAM_005639	Uncharacterized protein. (650 aa)

Your Current Organism:

Aspergillus rambellii

NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARAM_000653	ARAM_000716	A0A0F8WWF6	A0A0F8U931	Putative RSC complex subunit (RSC1).	MARVEL domain-containing protein.	0.769
ARAM_000653	ARAM_001146	A0A0F8WWF6	A0A0F8V5F1	Putative RSC complex subunit (RSC1).	Uncharacterized protein.	0.630
ARAM_000653	ARAM_002518	A0A0F8WWF6	A0A0F8WIA2	Putative RSC complex subunit (RSC1).	SWI-SNF complex subunit (BAF60b).	0.988
ARAM_000653	ARAM_002540	A0A0F8WWF6	A0A0F8V4H1	Putative RSC complex subunit (RSC1).	Uncharacterized protein.	0.992
ARAM_000653	ARAM_002812	A0A0F8WWF6	A0A0F8V5V9	Putative RSC complex subunit (RSC1).	Chromatin structure-remodeling complex subunit snf2.	0.990
ARAM_000653	ARAM_003053	A0A0F8WWF6	A0A0F8VSR4	Putative RSC complex subunit (RSC1).	ARID domain-containing protein.	0.690
ARAM_000653	ARAM_003516	A0A0F8WWF6	A0A0F8U1P6	Putative RSC complex subunit (RSC1).	Uncharacterized protein.	0.987
ARAM_000653	ARAM_003959	A0A0F8WWF6	A0A0F8W230	Putative RSC complex subunit (RSC1).	Nuclear localization protein.	0.927
ARAM_000653	ARAM_004476	A0A0F8WWF6	A0A0F8VK36	Putative RSC complex subunit (RSC1).	RSC complex subunit Sfh1.	0.978
ARAM_000653	ARAM_005018	A0A0F8WWF6	A0A0F8WSC3	Putative RSC complex subunit (RSC1).	Putative chromatin remodeling complex subunit (Arp9); Belongs to the actin family.	0.953
ARAM_000653	ARAM_005331	A0A0F8WWF6	A0A0F8TYB1	Putative RSC complex subunit (RSC1).	Chromatin remodeling complex subunit (Rsc9).	0.933
ARAM_000653	ARAM_005639	A0A0F8WWF6	A0A0F8X0S1	Putative RSC complex subunit (RSC1).	Uncharacterized protein.	0.769
ARAM_000653	ARAM_006119	A0A0F8WWF6	A0A0F8VE20	Putative RSC complex subunit (RSC1).	Uncharacterized protein.	0.630
ARAM_000653	ARAM_007191	A0A0F8WWF6	A0A0F8U9C5	Putative RSC complex subunit (RSC1).	Uncharacterized protein.	0.792
ARAM_000716	ARAM_000653	A0A0F8U931	A0A0F8WWF6	MARVEL domain-containing protein.	Putative RSC complex subunit (RSC1).	0.769
ARAM_000716	ARAM_001146	A0A0F8U931	A0A0F8V5F1	MARVEL domain-containing protein.	Uncharacterized protein.	0.651
ARAM_000716	ARAM_002518	A0A0F8U931	A0A0F8WIA2	MARVEL domain-containing protein.	SWI-SNF complex subunit (BAF60b).	0.779
ARAM_000716	ARAM_002540	A0A0F8U931	A0A0F8V4H1	MARVEL domain-containing protein.	Uncharacterized protein.	0.781
ARAM_000716	ARAM_003516	A0A0F8U931	A0A0F8U1P6	MARVEL domain-containing protein.	Uncharacterized protein.	0.746
ARAM_000716	ARAM_004476	A0A0F8U931	A0A0F8VK36	MARVEL domain-containing protein.	RSC complex subunit Sfh1.	0.788