(5 nodes) Transcription factor TFIIH core complex network (Aspergillus rambellii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARAM_000838	Putative TFIIH complex helicase Ssl2. (822 aa)
	ARAM_005453	Helicase ATP-binding domain-containing protein. (791 aa)
	ARAM_005652	Uncharacterized protein. (642 aa)
	ARAM_000725	TFIIH basal transcription factor complex p47 subunit. (630 aa)
	ARAM_006733	Uncharacterized protein. (368 aa)

Your Current Organism:

Aspergillus rambellii

NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARAM_000725	ARAM_000838	A0A0F8WDW8	A0A0F8U1W7	TFIIH basal transcription factor complex p47 subunit.	Putative TFIIH complex helicase Ssl2.	0.999
ARAM_000725	ARAM_005453	A0A0F8WDW8	A0A0F8U5D7	TFIIH basal transcription factor complex p47 subunit.	Helicase ATP-binding domain-containing protein.	0.999
ARAM_000725	ARAM_005652	A0A0F8WDW8	A0A0F8VIU8	TFIIH basal transcription factor complex p47 subunit.	Uncharacterized protein.	0.999
ARAM_000725	ARAM_006733	A0A0F8WDW8	A0A0F8WS77	TFIIH basal transcription factor complex p47 subunit.	Uncharacterized protein.	0.999
ARAM_000838	ARAM_000725	A0A0F8U1W7	A0A0F8WDW8	Putative TFIIH complex helicase Ssl2.	TFIIH basal transcription factor complex p47 subunit.	0.999
ARAM_000838	ARAM_005453	A0A0F8U1W7	A0A0F8U5D7	Putative TFIIH complex helicase Ssl2.	Helicase ATP-binding domain-containing protein.	0.999
ARAM_000838	ARAM_005652	A0A0F8U1W7	A0A0F8VIU8	Putative TFIIH complex helicase Ssl2.	Uncharacterized protein.	0.999
ARAM_000838	ARAM_006733	A0A0F8U1W7	A0A0F8WS77	Putative TFIIH complex helicase Ssl2.	Uncharacterized protein.	0.999
ARAM_005453	ARAM_000725	A0A0F8U5D7	A0A0F8WDW8	Helicase ATP-binding domain-containing protein.	TFIIH basal transcription factor complex p47 subunit.	0.999
ARAM_005453	ARAM_000838	A0A0F8U5D7	A0A0F8U1W7	Helicase ATP-binding domain-containing protein.	Putative TFIIH complex helicase Ssl2.	0.999
ARAM_005453	ARAM_005652	A0A0F8U5D7	A0A0F8VIU8	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.999
ARAM_005453	ARAM_006733	A0A0F8U5D7	A0A0F8WS77	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.999
ARAM_005652	ARAM_000725	A0A0F8VIU8	A0A0F8WDW8	Uncharacterized protein.	TFIIH basal transcription factor complex p47 subunit.	0.999
ARAM_005652	ARAM_000838	A0A0F8VIU8	A0A0F8U1W7	Uncharacterized protein.	Putative TFIIH complex helicase Ssl2.	0.999
ARAM_005652	ARAM_005453	A0A0F8VIU8	A0A0F8U5D7	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.999
ARAM_005652	ARAM_006733	A0A0F8VIU8	A0A0F8WS77	Uncharacterized protein.	Uncharacterized protein.	0.999
ARAM_006733	ARAM_000725	A0A0F8WS77	A0A0F8WDW8	Uncharacterized protein.	TFIIH basal transcription factor complex p47 subunit.	0.999
ARAM_006733	ARAM_000838	A0A0F8WS77	A0A0F8U1W7	Uncharacterized protein.	Putative TFIIH complex helicase Ssl2.	0.999
ARAM_006733	ARAM_005453	A0A0F8WS77	A0A0F8U5D7	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.999
ARAM_006733	ARAM_005652	A0A0F8WS77	A0A0F8VIU8	Uncharacterized protein.	Uncharacterized protein.	0.999