(17 nodes) RNA polymerase II, core complex, and Transcription elongation factor complex network (Aspergillus rambellii)

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second shell of interactors

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Known Interactions

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Predicted Interactions

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Your Input:
	ARAM_004966	RNA polymerase II subunit 3. (338 aa)
	ARAM_007037	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1076 aa)
	ARAM_004183	Uncharacterized protein. (463 aa)
	ARAM_007183	Uncharacterized protein. (1436 aa)
	ARAM_005255	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1255 aa)
	ARAM_000186	Metallothionein-I gene transcription activator. (76 aa)
	ARAM_005081	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1746 aa)
	ARAM_005143	FACT complex subunit spt16. (1020 aa)
	ARAM_002377	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (576 aa)
	ARAM_003795	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (128 aa)
	ARAM_001610	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (120 aa)
	ARAM_003545	Polymerase (RNA) II (DNA directed) polypeptide D. (148 aa)
	ARAM_006741	Uncharacterized protein. (621 aa)
	ARAM_004903	RNA polymerase II transcription elongation factor Rtf1p. (607 aa)
	ARAM_007321	CDC73_C domain-containing protein. (465 aa)
	ARAM_003330	DNA-directed RNA polymerase II subunit RPB11. (155 aa)
	ARAM_000480	Uncharacterized protein. (169 aa)

Your Current Organism:

Aspergillus rambellii

NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARAM_000186	ARAM_000480	A0A0F8UM88	A0A0F8XQQ0	Metallothionein-I gene transcription activator.	Uncharacterized protein.	0.999
ARAM_000186	ARAM_001610	A0A0F8UM88	A0A0F8W7H5	Metallothionein-I gene transcription activator.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.988
ARAM_000186	ARAM_002377	A0A0F8UM88	A0A0F8VU87	Metallothionein-I gene transcription activator.	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]	0.957
ARAM_000186	ARAM_003330	A0A0F8UM88	A0A0F8XKM0	Metallothionein-I gene transcription activator.	DNA-directed RNA polymerase II subunit RPB11.	0.999
ARAM_000186	ARAM_003545	A0A0F8UM88	A0A0F8WBZ1	Metallothionein-I gene transcription activator.	Polymerase (RNA) II (DNA directed) polypeptide D.	0.999
ARAM_000186	ARAM_003795	A0A0F8UM88	A0A0F8W1V0	Metallothionein-I gene transcription activator.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
ARAM_000186	ARAM_004183	A0A0F8UM88	A0A0F8UAG0	Metallothionein-I gene transcription activator.	Uncharacterized protein.	0.899
ARAM_000186	ARAM_004903	A0A0F8UM88	A0A0F8X3V3	Metallothionein-I gene transcription activator.	RNA polymerase II transcription elongation factor Rtf1p.	0.890
ARAM_000186	ARAM_004966	A0A0F8UM88	A0A0F8U114	Metallothionein-I gene transcription activator.	RNA polymerase II subunit 3.	0.999
ARAM_000186	ARAM_005081	A0A0F8UM88	A0A0F8V6Q0	Metallothionein-I gene transcription activator.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
ARAM_000186	ARAM_005143	A0A0F8UM88	A0A0F8VM32	Metallothionein-I gene transcription activator.	FACT complex subunit spt16.	0.956
ARAM_000186	ARAM_005255	A0A0F8UM88	A0A0F8UK09	Metallothionein-I gene transcription activator.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
ARAM_000186	ARAM_006741	A0A0F8UM88	A0A0F8X3L7	Metallothionein-I gene transcription activator.	Uncharacterized protein.	0.898
ARAM_000186	ARAM_007037	A0A0F8UM88	A0A0F8U7V3	Metallothionein-I gene transcription activator.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.992
ARAM_000186	ARAM_007183	A0A0F8UM88	A0A0F8UC40	Metallothionein-I gene transcription activator.	Uncharacterized protein.	0.930
ARAM_000186	ARAM_007321	A0A0F8UM88	A0A0F8XJM0	Metallothionein-I gene transcription activator.	CDC73_C domain-containing protein.	0.900
ARAM_000480	ARAM_000186	A0A0F8XQQ0	A0A0F8UM88	Uncharacterized protein.	Metallothionein-I gene transcription activator.	0.999
ARAM_000480	ARAM_001610	A0A0F8XQQ0	A0A0F8W7H5	Uncharacterized protein.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.996
ARAM_000480	ARAM_002377	A0A0F8XQQ0	A0A0F8VU87	Uncharacterized protein.	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]	0.956
ARAM_000480	ARAM_003330	A0A0F8XQQ0	A0A0F8XKM0	Uncharacterized protein.	DNA-directed RNA polymerase II subunit RPB11.	0.999