(8 nodes) RNA polymerase II, core complex network (Aspergillus rambellii)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	ARAM_004966	RNA polymerase II subunit 3. (338 aa)
	ARAM_005255	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1255 aa)
	ARAM_000186	Metallothionein-I gene transcription activator. (76 aa)
	ARAM_005081	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1746 aa)
	ARAM_003795	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (128 aa)
	ARAM_003545	Polymerase (RNA) II (DNA directed) polypeptide D. (148 aa)
	ARAM_003330	DNA-directed RNA polymerase II subunit RPB11. (155 aa)
	ARAM_000480	Uncharacterized protein. (169 aa)

Your Current Organism:

Aspergillus rambellii

NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARAM_000186	ARAM_000480	A0A0F8UM88	A0A0F8XQQ0	Metallothionein-I gene transcription activator.	Uncharacterized protein.	0.999
ARAM_000186	ARAM_003330	A0A0F8UM88	A0A0F8XKM0	Metallothionein-I gene transcription activator.	DNA-directed RNA polymerase II subunit RPB11.	0.999
ARAM_000186	ARAM_003545	A0A0F8UM88	A0A0F8WBZ1	Metallothionein-I gene transcription activator.	Polymerase (RNA) II (DNA directed) polypeptide D.	0.999
ARAM_000186	ARAM_003795	A0A0F8UM88	A0A0F8W1V0	Metallothionein-I gene transcription activator.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
ARAM_000186	ARAM_004966	A0A0F8UM88	A0A0F8U114	Metallothionein-I gene transcription activator.	RNA polymerase II subunit 3.	0.999
ARAM_000186	ARAM_005081	A0A0F8UM88	A0A0F8V6Q0	Metallothionein-I gene transcription activator.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
ARAM_000186	ARAM_005255	A0A0F8UM88	A0A0F8UK09	Metallothionein-I gene transcription activator.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
ARAM_000480	ARAM_000186	A0A0F8XQQ0	A0A0F8UM88	Uncharacterized protein.	Metallothionein-I gene transcription activator.	0.999
ARAM_000480	ARAM_003330	A0A0F8XQQ0	A0A0F8XKM0	Uncharacterized protein.	DNA-directed RNA polymerase II subunit RPB11.	0.999
ARAM_000480	ARAM_003545	A0A0F8XQQ0	A0A0F8WBZ1	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide D.	0.999
ARAM_000480	ARAM_003795	A0A0F8XQQ0	A0A0F8W1V0	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
ARAM_000480	ARAM_004966	A0A0F8XQQ0	A0A0F8U114	Uncharacterized protein.	RNA polymerase II subunit 3.	0.999
ARAM_000480	ARAM_005081	A0A0F8XQQ0	A0A0F8V6Q0	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
ARAM_000480	ARAM_005255	A0A0F8XQQ0	A0A0F8UK09	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
ARAM_003330	ARAM_000186	A0A0F8XKM0	A0A0F8UM88	DNA-directed RNA polymerase II subunit RPB11.	Metallothionein-I gene transcription activator.	0.999
ARAM_003330	ARAM_000480	A0A0F8XKM0	A0A0F8XQQ0	DNA-directed RNA polymerase II subunit RPB11.	Uncharacterized protein.	0.999
ARAM_003330	ARAM_003545	A0A0F8XKM0	A0A0F8WBZ1	DNA-directed RNA polymerase II subunit RPB11.	Polymerase (RNA) II (DNA directed) polypeptide D.	0.999
ARAM_003330	ARAM_003795	A0A0F8XKM0	A0A0F8W1V0	DNA-directed RNA polymerase II subunit RPB11.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
ARAM_003330	ARAM_004966	A0A0F8XKM0	A0A0F8U114	DNA-directed RNA polymerase II subunit RPB11.	RNA polymerase II subunit 3.	0.999
ARAM_003330	ARAM_005081	A0A0F8XKM0	A0A0F8V6Q0	DNA-directed RNA polymerase II subunit RPB11.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999